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Report for CCDS32089.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32089.1 Public Homo sapiens 14 ARMH4 24 110 108 CCDS HistoryNCBI Gene:145407Re-query CCDS DB by CCDS ID:32089.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32089.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267485.7 ENSP00000267485.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000267485.7Link to Ensembl Protein Viewer:ENSP00000267485.7Re-query CCDS DB by Nucleotide ID:ENST00000267485Re-query CCDS DB by Protein ID:ENSP00000267485
Original member Current member NCBI NM_001001872.4 NP_001001872.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001872.4Link to Protein Sequence:NP_001001872.2Re-query CCDS DB by Nucleotide ID:NM_001001872Re-query CCDS DB by Protein ID:NP_001001872Link to BLAST:NP_001001872.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001872.2 774 Q86TY3-1 774 100% 0 0

Chromosomal Locations for CCDS 32089.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 58004736 58004804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58005048 58005182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58012119 58012150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58096724 58096981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58131512 58131721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58133090 58133341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58137990 58139358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2325 nt):
ATGAGAGGACCGATTGTATTGCACATTTGTCTGGCTTTCTGTAGCCTTCTGCTTTTCAGCGTTGCCACAC
AATGTCTGGCCTTCCCCAAAATAGAAAGGAGGAGGGAGATAGCACATGTTCATGCGGAAAAAGGGCAGTC
CGATAAGATGAACACCGATGACCTAGAAAATAGCTCTGTTACCTCAAAGCAGACTCCCCAACTGGTGGTC
TCTGAAGATCCAATGATGATGTCAGCAGTACCATCGGCAACATCATTAAATAAAGCATTCTCGATTAACA
AAGAAACCCAGCCTGGACAAGCTGGGCTCATGCAAACAGAACGCCCTGGTGTTTCCACACCTACTGAGTC
AGGTGTCCCCTCAGCTGAAGAAGTATTTGGTTCCAGCCAGCCAGAGAGAATATCTCCTGAAAGTGGACTT
GCCAAGGCCATGTTAACCATTGCTATCACTGCGACTCCTTCTCTGACTGTTGATGAAAAGGAGGAACTCC
TTACAAGCACTAACTTTCAGCCCATTGTAGAAGAGATCACAGAAACCACAAAAGGTTTTCTGAAGTATAT
GGATAATCAATCATTTGCAACTGAAAGTCAGGAAGGAGTTGGTTTGGGACATTCACCTTCATCCTATGTG
AATACTAAGGAAATGCTAACCACCAATCCAAAGACTGAGAAATTTGAAGCAGACACAGACCACAGGACAA
CTTCTTTTCCTGGTGCTGAGTCCACAGCAGGCAGTGAGCCTGGAAGCCTCACCCCTGATAAGGAGAAGCC
TTCGCAGATGACAGCTGATAACACCCAGGCTGCTGCCACCAAGCAACCACTCGAAACTTCCGAGTACACC
CTGAGTGTTGAGCCAGAAACTGATAGTCTGCTGGGAGCCCCAGAAGTCACAGTGAGTGTCAGCACAGCTG
TTCCAGCTGCCTCTGCCTTAAGTGATGAGTGGGATGACACCAAATTAGAGAGTGTAAGCCGGATAAGGAC
CCCCAAGCTTGGAGACAATGAAGAGACTCAGGTGAGAACGGAGATGTCTCAGACAGCACAAGTAAGCCAT
GAGGGTATGGAAGGAGGCCAGCCTTGGACAGAGGCTGCACAGGTGGCTCTGGGGCTGCCTGAAGGGGAAA
CACACACGGGCACAGCCCTGCTAATAGCGCATGGGAATGAGAGATCACCTGCTTTCACTGATCAAAGTTC
CTTTACCCCCACAAGTCTGATGGAAGACATGAAAGTTTCCATTGTGAACTTGCTCCAAAGTACGGGAGAC
TTCACGGAATCCACCAAGGAAAACGATGCCCTGTTTTTCTTAGAAACCACTGTTTCTGTCTCTGTATATG
AGTCTGAGGCAGACCAACTGTTGGGAAATACAATGAAAGACATCATCACTCAAGAGATGACAACAGCTGT
TCAAGAGCCAGATGCCACTTTATCCATGGTGACACAAGAGCAGGTTGCTACCCTCGAGCTTATCAGAGAC
AGTGGCAAGACTGAGGAAGAAAAGGAGGACCCCTCTCCTGTGTCTGACGTTCCTGGTGTTACTCAGCTGT
CAAGAAGATGGGAGCCTCTGGCCACTACAATTTCAACTACAGTCGTCCCTTTGTCTTTTGAAGTTACTCC
CACTGTGGAAGAACAAATGGACACAGTCACAGGGCCAAATGAGGAGTTCACACCAGTTCTGGGATCTCCA
GTGACACCTCCTGGAATAATGGTGGGGGAACCCAGCATTTCCCCTGCACTTCCTGCTTTGGAGGCATCCT
CTGAGAGAAGAACTGTTGTTCCATCTATTACTCGTGTTAATACAGCTGCCTCATATGGCCTGGACCAACT
TGAATCTGAAGAGGGACAAGAAGATGAGGATGAAGAGGATGAAGAAGATGAAGATGAAGAAGAGGAAGAT
GAGGAAGAAGATGAGGAAGATAAAGATGCAGACTCGCTGGATGAGGGCTTGGATGGTGACACTGAGCTGC
CAGGTTTTACCCTCCCTGGTATCACATCCCAGGAACCAGGCTTAGAGGAGGGAAACATGGACCTGTTGGA
GGGAGCTACCTACCAGGTGCCAGATGCCCTCGAGTGGGAACAGCAGAATCAAGGCCTGGTGAGAAGCTGG
ATGGAAAAATTAAAAGACAAGGCTGGTTACATGTCTGGGATGCTGGTGCCTGTAGGGGTTGGGATAGCTG
GAGCCTTGTTCATCTTGGGAGCCCTCTACAGCATTAAGGTTATGAATCGCCGAAGGAGAAATGGCTTCAA
AAGGCATAAAAGAAAGCAGAGAGAATTCAACAGCATGCAAGATCGAGTAATGCTCTTAGCCGACAGCTCT
GAAGATGAATTTTGA

Translation (774 aa):
MRGPIVLHICLAFCSLLLFSVATQCLAFPKIERRREIAHVHAEKGQSDKMNTDDLENSSVTSKQTPQLVV
SEDPMMMSAVPSATSLNKAFSINKETQPGQAGLMQTERPGVSTPTESGVPSAEEVFGSSQPERISPESGL
AKAMLTIAITATPSLTVDEKEELLTSTNFQPIVEEITETTKGFLKYMDNQSFATESQEGVGLGHSPSSYV
NTKEMLTTNPKTEKFEADTDHRTTSFPGAESTAGSEPGSLTPDKEKPSQMTADNTQAAATKQPLETSEYT
LSVEPETDSLLGAPEVTVSVSTAVPAASALSDEWDDTKLESVSRIRTPKLGDNEETQVRTEMSQTAQVSH
EGMEGGQPWTEAAQVALGLPEGETHTGTALLIAHGNERSPAFTDQSSFTPTSLMEDMKVSIVNLLQSTGD
FTESTKENDALFFLETTVSVSVYESEADQLLGNTMKDIITQEMTTAVQEPDATLSMVTQEQVATLELIRD
SGKTEEEKEDPSPVSDVPGVTQLSRRWEPLATTISTTVVPLSFEVTPTVEEQMDTVTGPNEEFTPVLGSP
VTPPGIMVGEPSISPALPALEASSERRTVVPSITRVNTAASYGLDQLESEEGQEDEDEEDEEDEDEEEED
EEEDEEDKDADSLDEGLDGDTELPGFTLPGITSQEPGLEEGNMDLLEGATYQVPDALEWEQQNQGLVRSW
MEKLKDKAGYMSGMLVPVGVGIAGALFILGALYSIKVMNRRRRNGFKRHKRKQREFNSMQDRVMLLADSS
EDEF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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