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Report for CCDS4450.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4450.1 Public Homo sapiens 5 TBC1D9B 24 110 108 CCDS HistoryNCBI Gene:23061Re-query CCDS DB by CCDS ID:4450.1Re-query CCDS DB by GeneID:23061See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4450.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355235.8 ENSP00000347375.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355235.8Link to Ensembl Protein Viewer:ENSP00000347375.3Re-query CCDS DB by Nucleotide ID:ENST00000355235Re-query CCDS DB by Protein ID:ENSP00000347375
Original member Current member NCBI NM_015043.4 NP_055858.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015043.4Link to Protein Sequence:NP_055858.2Re-query CCDS DB by Nucleotide ID:NM_015043Re-query CCDS DB by Protein ID:NP_055858Link to BLAST:NP_055858.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055858.2 1233 Q66K14-2 1233 100% 0 0

Chromosomal Locations for CCDS 4450.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 179863448 179864128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179865254 179865360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179865838 179865888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179867778 179867849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179869769 179869834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179870255 179870495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179871462 179871530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179872892 179872990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179873119 179873248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179874902 179875187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179875920 179876037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179878309 179878523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179879047 179879197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179879628 179879789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179888103 179888312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179891379 179891586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179893209 179893467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179894386 179894614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179899189 179899307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179904702 179904812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179907704 179907821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3702 nt):
ATGTGGCTGAGCCCGGAGGAGGTGCTGGTGGCCAATGCGCTGTGGGTGACGGAGCGGGCCAACCCCTTCT
TCGTGCTGCAGCGACGCCGGGGCCACGGCAGGGGCGGCGGCCTTACGGGTCTTCTCGTGGGCACCCTGGA
CGTGGTGCTGGACTCCAGTGCCCGCGTGGCCCCTTACCGCATCCTGCACCAGACCCAGGACTCCCAGGTC
TACTGGACAGTGGCGTGTGGTTCTTCCCGCAAAGAGATCACAAAACACTGGGAATGGCTGGAAAATAACT
TGCTCCAGACACTGTCCATCTTCGACAGTGAGGAAGATATCACCACCTTCGTCAAGGGCAAGATACACGG
AATCATCGCAGAAGAGAACAAGAACCTGCAGCCCCAGGGAGACGAGGACCCCGGGAAGTTCAAGGAGGCT
GAGCTGAAGATGCGGAAGCAGTTTGGGATGCCTGAGGGCGAGAAGCTGGTGAATTACTACTCCTGCAGCT
ACTGGAAGGGCCGCGTGCCCCGGCAGGGCTGGCTGTACCTGACGGTCAACCACCTGTGCTTCTACTCCTT
CCTGCTGGGGAAGGAAGTGAGCCTCGTGGTGCAGTGGGTGGACATAACGCGTCTGGAGAAGAACGCCACC
CTGCTCTTCCCCGAGAGCATCCGTGTGGACACCCGCGACCAGGAGCTCTTCTTCTCCATGTTCCTCAACA
TCGGCGAGACCTTCAAGCTCATGGAGCAGTTGGCCAACCTGGCCATGCGGCAGCTGCTGGACAGCGAGGG
CTTCCTGGAGGACAAGGCCCTGCCTAGGCCCATCCGGCCACACAGGAACATCTCAGCCCTGAAGCGAGAC
CTGGACGCCCGAGCCAAGAATGAGTGCTACCGAGCCACGTTCCGGCTGCCCAGGGATGAGCGGCTAGACG
GCCACACAAGCTGCACCCTGTGGACGCCGTTCAACAAGCTGCACATCCCTGGCCAGATGTTCATCTCCAA
CAACTACATCTGCTTCGCCAGCAAGGAGGAGGACGCTTGCCACCTCATCATACCCCTGAGGGAGGTGACC
ATTGTCGAAAAAGCTGACAGCTCCAGCGTGCTGCCCAGCCCCCTGTCCATCAGCACCAAAAGCAAAATGA
CATTCCTGTTTGCCAACCTGAAAGACCGTGATTTCTTGGTGCAGAGGATCTCTGACTTCCTCCAGAAAAC
ACCATCCAAGCAGCCAGGCAGTATCGGGAGCAGGAAAGCCAGTGTTGTGGACCCTAGCACAGAGTCTTCC
CCAGCTCCTCAGGAGGGGTCGGAGCAGCCCGCCAGCCCAGCCTCTCCCCTCAGCAGCCGCCAGAGCTTCT
GTGCGCAGGAGGCGCCAACCGCATCCCAGGGCCTGCTGAAGCTCTTCCAGAAAAACTCGCCCATGGAGGA
CCTTGGAGCCAAGGGGGCCAAGGAGAAGATGAAAGAGGAGTCATGGCACATCCACTTCTTCGAGTACGGG
CGTGGCGTGTGCATGTACCGCACAGCCAAGACGCGGGCACTGGTCCTGAAGGGTATCCCTGAGAGCCTCC
GGGGAGAGCTGTGGCTCCTCTTCTCCGGGGCCTGGAATGAGATGGTGACTCACCCCGGGTACTATGCTGA
GCTGGTGGAGAAGTCCACCGGGAAGTACAGCCTGGCCACAGAGGAGATCGAGCGAGACCTGCACCGCTCC
ATGCCCGAGCACCCTGCCTTCCAGAACGAGCTGGGGATTGCTGCCCTCCGGCGGGTGCTGACTGCCTATG
CCTTCCGAAACCCCACCATCGGCTACTGCCAGGCAATGAACATCGTGACCTCGGTGCTCCTGCTCTATGG
CAGTGAGGAGGAGGCCTTCTGGCTCCTGGTGGCCCTGTGCGAGCGCATGCTGCCCGACTACTACAACACC
AGGGTGGTGGGAGCCCTGGTGGACCAAGGCATCTTCGAAGAGCTCACGAGAGACTTCCTGCCGCAGCTCT
CGGAGAAGATGCAGGACCTGGGGGTGATCTCCAGCATCTCGCTGTCCTGGTTCCTGACCCTCTTCCTCAG
CGTCATGCCCTTCGAGAGCGCCGTGGTCATCGTCGACTGCTTTTTCTATGAGGGCATCAAGGTGATCCTG
CAGGTGGCCCTGGCCGTCCTGGACGCCAACATGGAGCAGCTGCTGGGCTGCAGCGACGAGGGCGAGGCCA
TGACCATGCTGGGCAGATACCTGGATAATGTGGTCAACAAGCAGAGTGTCTCTCCTCCTATCCCGCACCT
CCGTGCCTTGCTGAGCAGCAGCGATGACCCCCCTGCAGAGGTGGACATCTTTGAGCTCCTGAAAGTGTCC
TATGAGAAATTCAGCAGCCTGAGGGCCGAAGACATTGAGCAGATGCGGTTTAAACAGAGGCTGAAAGTGA
TCCAGTCCTTGGAGGACACGGCCAAGAGGAGTGTGGTCCGAGCTATACCTGTGGACATTGGTTTCTCCAT
TGAAGAGCTGGAGGACCTTTACATGGTGTTTAAGGCCAAGCACCTGGCTAGCCAGTACTGGGGGTGCAGC
CGCACAATGGCCGGCCGTCGGGACCCCAGCCTGCCCTACCTGGAGCAGTACCGGATTGATGCCAGCCAGT
TCCGGGAACTCTTTGCCAGCCTGACACCCTGGGCCTGTGGCTCCCACACACCTCTGCTGGCAGGGCGCAT
GTTCAGGCTCCTGGACGAAAACAAGGACTCGCTGATCAACTTCAAGGAGTTCGTGACAGGGATGAGCGGG
ATGTACCACGGGGACCTGACAGAGAAGCTCAAGGTGCTCTACAAGCTACACCTTCCCCCAGCTCTGAGCC
CAGAGGAAGCCGAGTCAGCCCTGGAGGCGGCCCATTATTTCACAGAGGACAGCTCCTCAGAAGAAGCACT
ACCACAGGAAGAGCAAGAAGGAAGTGGAAGTGAGGAGAGAGGAGAGGAGAAGGGGACCAGCTCTCCGGAC
TATCGGCACTACCTTCGAATGTGGGCCAAGGAGAAAGAGGCTCAGAAGGAGACGATTAAGGATCTTCCCA
AGATGAACCAGGAGCAGTTCATTGAGCTGTGCAAGACGCTTTACAACATGTTCAGTGAAGACCCCATGGA
GCAGGACCTGTACCACGCCATCGCCACCGTGGCCAGCCTCCTGCTCCGCATCGGAGAGGTGGGGAAGAAG
TTCTCAGCCCGCACAGGCAGGAAGCCCAGGGACTGTGCCACTGAGGAGGACGAGCCACCAGCACCCGAAC
TGCATCAGGACGCAGCCAGGGAGCTTCAGCCCCCAGCTGCAGGAGACCCCCAAGCCAAAGCAGGCGGAGA
CACACACCTCGGAAAAGCCCCACAGGAGAGCCAGGTGGTGGTGGAGGGGGGCAGCGGCGAGGGACAGGGC
TCACCCTCCCAGCTGCTGTCTGACGATGAAACCAAAGACGACATGTCCATGTCCTCCTACTCGGTGGTCA
GCACGGGCTCCCTGCAATGTGAAGACCTTGCAGACGACACGGTGCTGGTGGGCGGGGAGGCCTGCAGCCC
CACAGCGCGCATCGGCGGCACCGTCGACACCGACTGGTGCATCTCCTTTGAGCAGATCCTGGCCTCCATC
CTGACGGAGTCCGTGCTGGTGAACTTCTTTGAGAAGAGAGTGGACATTGGACTCAAGATCAAGGACCAAA
AGAAAGTGGAGAGACAGTTCAGCACCGCCAGTGACCATGAGCAGCCTGGAGTTTCCGGCTGA

Translation (1233 aa):
MWLSPEEVLVANALWVTERANPFFVLQRRRGHGRGGGLTGLLVGTLDVVLDSSARVAPYRILHQTQDSQV
YWTVACGSSRKEITKHWEWLENNLLQTLSIFDSEEDITTFVKGKIHGIIAEENKNLQPQGDEDPGKFKEA
ELKMRKQFGMPEGEKLVNYYSCSYWKGRVPRQGWLYLTVNHLCFYSFLLGKEVSLVVQWVDITRLEKNAT
LLFPESIRVDTRDQELFFSMFLNIGETFKLMEQLANLAMRQLLDSEGFLEDKALPRPIRPHRNISALKRD
LDARAKNECYRATFRLPRDERLDGHTSCTLWTPFNKLHIPGQMFISNNYICFASKEEDACHLIIPLREVT
IVEKADSSSVLPSPLSISTKSKMTFLFANLKDRDFLVQRISDFLQKTPSKQPGSIGSRKASVVDPSTESS
PAPQEGSEQPASPASPLSSRQSFCAQEAPTASQGLLKLFQKNSPMEDLGAKGAKEKMKEESWHIHFFEYG
RGVCMYRTAKTRALVLKGIPESLRGELWLLFSGAWNEMVTHPGYYAELVEKSTGKYSLATEEIERDLHRS
MPEHPAFQNELGIAALRRVLTAYAFRNPTIGYCQAMNIVTSVLLLYGSEEEAFWLLVALCERMLPDYYNT
RVVGALVDQGIFEELTRDFLPQLSEKMQDLGVISSISLSWFLTLFLSVMPFESAVVIVDCFFYEGIKVIL
QVALAVLDANMEQLLGCSDEGEAMTMLGRYLDNVVNKQSVSPPIPHLRALLSSSDDPPAEVDIFELLKVS
YEKFSSLRAEDIEQMRFKQRLKVIQSLEDTAKRSVVRAIPVDIGFSIEELEDLYMVFKAKHLASQYWGCS
RTMAGRRDPSLPYLEQYRIDASQFRELFASLTPWACGSHTPLLAGRMFRLLDENKDSLINFKEFVTGMSG
MYHGDLTEKLKVLYKLHLPPALSPEEAESALEAAHYFTEDSSSEEALPQEEQEGSGSEERGEEKGTSSPD
YRHYLRMWAKEKEAQKETIKDLPKMNQEQFIELCKTLYNMFSEDPMEQDLYHAIATVASLLLRIGEVGKK
FSARTGRKPRDCATEEDEPPAPELHQDAARELQPPAAGDPQAKAGGDTHLGKAPQESQVVVEGGSGEGQG
SPSQLLSDDETKDDMSMSSYSVVSTGSLQCEDLADDTVLVGGEACSPTARIGGTVDTDWCISFEQILASI
LTESVLVNFFEKRVDIGLKIKDQKKVERQFSTASDHEQPGVSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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