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Report for CCDS30735.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30735.1 Public Homo sapiens 1 ALG6 24 110 108 CCDS HistoryNCBI Gene:29929Re-query CCDS DB by CCDS ID:30735.1Re-query CCDS DB by GeneID:29929See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30735.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263440.6 ENSP00000263440.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263440.6Link to Ensembl Protein Viewer:ENSP00000263440.5Re-query CCDS DB by Nucleotide ID:ENST00000263440Re-query CCDS DB by Protein ID:ENSP00000263440
Original member Current member NCBI NM_013339.4 NP_037471.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013339.4Link to Protein Sequence:NP_037471.2Re-query CCDS DB by Nucleotide ID:NM_013339Re-query CCDS DB by Protein ID:NP_037471Link to BLAST:NP_037471.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037471.2 507 Q9Y672 507 100% 0 0

Chromosomal Locations for CCDS 30735.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 63370978 63371059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63396513 63396597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63402254 63402343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63404453 63404541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63406317 63406399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63407062 63407126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63411146 63411331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63411926 63412061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63414061 63414146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63415873 63415957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63419370 63419440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63428733 63428801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63428928 63429126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63436823 63437020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1524 nt):
ATGGAGAAATGGTACTTGATGACAGTAGTGGTTTTAATAGGACTAACAGTACGATGGACAGTGTCTCTTA
ATTCTTATTCAGGTGCTGGTAAACCGCCTATGTTTGGTGATTATGAAGCTCAGAGACACTGGCAAGAAAT
AACTTTTAATTTACCGGTCAAACAATGGTATTTTAACAGCAGTGATAACAATTTACAGTATTGGGGATTG
GATTACCCACCTCTTACAGCTTATCATAGTCTCCTATGTGCATATGTGGCAAAGTTTATAAATCCAGACT
GGATTGCTCTCCATACATCACGTGGATATGAGAGTCAGGCACATAAGCTCTTCATGCGTACAACAGTTTT
AATTGCTGATCTGCTGATTTACATACCTGCAGTGGTTTTGTACTGTTGTTGCTTAAAAGAAATCTCAACT
AAGAAAAAGATTGCTAATGCATTATGCATCTTGCTGTATCCAGGCCTTATTCTTATAGACTATGGACATT
TTCAATATAATTCTGTGAGTCTTGGCTTTGCTTTGTGGGGTGTTCTTGGAATATCTTGTGACTGCGACCT
CCTAGGGTCACTGGCATTTTGCTTAGCTATAAATTATAAACAGATGGAACTTTACCACGCCTTGCCATTT
TTTTGCTTTTTACTTGGCAAGTGTTTTAAAAAAGGCCTCAAAGGAAAGGGGTTTGTGTTGCTAGTTAAGC
TAGCTTGTATTGTTGTGGCTTCCTTCGTTCTCTGCTGGCTGCCATTCTTTACAGAAAGGGAACAAACCCT
GCAGGTTCTAAGAAGACTCTTCCCGGTTGATCGTGGATTATTTGAGGATAAAGTAGCCAATATTTGGTGC
AGCTTCAATGTCTTTCTGAAGATTAAGGATATTTTGCCACGTCACATCCAATTAATAATGAGCTTTTGTT
CTACGTTTTTGAGCCTGCTTCCTGCATGCATAAAATTAATACTTCAGCCCTCTTCCAAAGGATTCAAATT
TACACTGGTTAGCTGTGCGCTATCATTCTTTTTATTTTCTTTCCAAGTACATGAAAAATCCATTCTCTTG
GTGTCACTACCAGTCTGCTTAGTTTTAAGTGAAATTCCTTTTATGTCTACTTGGTTTTTACTTGTGTCAA
CATTTAGTATGCTACCTCTTCTATTGAAGGATGAACTCCTAATGCCCTCTGTTGTGACAACAATGGCATT
TTTTATAGCTTGTGTAACTTCCTTTTCAATATTTGAAAAGACTTCTGAAGAAGAACTGCAGTTGAAATCC
TTTTCCATTTCTGTGAGGAAATATCTTCCATGTTTTACATTTCTTTCCAGAATTATACAATATTTGTTTC
TTATCTCAGTCATCACTATGGTGCTTCTGACGTTGATGACTGTCACACTGGATCCTCCTCAGAAACTACC
GGACTTGTTTTCTGTATTGGTGTGTTTTGTATCTTGCTTGAACTTCCTGTTCTTCTTGGTATACTTTAAC
ATTATTATTATGTGGGATTCCAAAAGTGGAAGAAATCAGAAGAAAATCAGCTAG

Translation (507 aa):
MEKWYLMTVVVLIGLTVRWTVSLNSYSGAGKPPMFGDYEAQRHWQEITFNLPVKQWYFNSSDNNLQYWGL
DYPPLTAYHSLLCAYVAKFINPDWIALHTSRGYESQAHKLFMRTTVLIADLLIYIPAVVLYCCCLKEIST
KKKIANALCILLYPGLILIDYGHFQYNSVSLGFALWGVLGISCDCDLLGSLAFCLAINYKQMELYHALPF
FCFLLGKCFKKGLKGKGFVLLVKLACIVVASFVLCWLPFFTEREQTLQVLRRLFPVDRGLFEDKVANIWC
SFNVFLKIKDILPRHIQLIMSFCSTFLSLLPACIKLILQPSSKGFKFTLVSCALSFFLFSFQVHEKSILL
VSLPVCLVLSEIPFMSTWFLLVSTFSMLPLLLKDELLMPSVVTTMAFFIACVTSFSIFEKTSEEELQLKS
FSISVRKYLPCFTFLSRIIQYLFLISVITMVLLTLMTVTLDPPQKLPDLFSVLVCFVSCLNFLFFLVYFN
IIIMWDSKSGRNQKKIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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