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Report for CCDS50437.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50437.2 Public Mus musculus 19 Ankrd2 23 108 98 CCDS HistoryNCBI Gene:56642Re-query CCDS DB by CCDS ID:50437.2Re-query CCDS DB by GeneID:56642See the combined annotation on chromosome 19 in Sequence Viewer

Public Note for CCDS 50437.1
The coding region has been updated to extend the N-terminus and this extension is supported by conservation and transcript data.

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 50437.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000238137.1 ENSMUSP00000157671.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000238137.1Link to Ensembl Protein Viewer:ENSMUSP00000157671.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000238137Re-query CCDS DB by Protein ID:ENSMUSP00000157671
Original member Current member NCBI NM_020033.2 NP_064417.2 Accepted alive Link to Nucleotide Sequence:NM_020033.2Link to Protein Sequence:NP_064417.2Re-query CCDS DB by Nucleotide ID:NM_020033Re-query CCDS DB by Protein ID:NP_064417Link to BLAST:NP_064417.2

Chromosomal Locations for CCDS 50437.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 42036036 42036122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42039850 42039951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42040084 42040242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42040336 42040443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42041952 42042050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42042369 42042467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42043753 42043851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42044043 42044141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42044861 42045007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGGAGGGTACCATGGAGGGGCCCGAGGCGGTGCAGAGAGCCACAGAGCTCATCGAGCAGCGGCTTGCCC
AGGAGGAAGAGACTGAGAAACTTCGAAGATCCGCTCCTGGGAAGCTGTCCATGGACATGCTAGTGCTAGA
GGAAGAGAAGCGCCTCGGGGTTCAGAGTCCTGCTTTACAAAAGGTTAAGGGCCAAGAGCGCGTGCGCAAG
ACATCCCTGGACCTGCGACGTGAGATCATTGATGTGGGTGGGATCCAGAACCTCATTGAACTGAGGAAAA
AACGCAAGCAGAAAAAGCGAGATGCCCTGGCTGCAGCCCAGGAGCCTCCTCCAGAGCCAGAGGAGATCAC
CGGCCCTGTGAATGAGGAGACATTCCTGAAAGCTGCAGTGGAGGGGAAAATGAAAGTCATTGACAAGTAC
CTGGCGGACGGAGGTTCAGCGGACACCTGTGATGAGTTCCGTCGGACAGCACTGCATCGGGCCTCCCTGG
AGGGACACATGGAGATACTGGAGAAACTTCTGGAGAATGGGGCCACCGTGGACTTCCAGGATCGGCTGGA
CTGCACAGCCATGCACTGGGCCTGCCGTGGGGGCCACCTGGAGGTGGTGAGACTCCTGCAAAGCCGGGGG
GCCGACACCAACGTGAGAGACAAGCTACTGAGCACTCCCCTGCATGTGGCCGTCCGTACTGGACACGTGG
AGATTGTGGAACATTTTCTTTCCCTGGGCTTGGATATCAATGCCAAAGACAGAGAAGGGGACAGTGCCCT
ACATGATGCCGTGAGACTCAACCGCTACAAAATCATCAAACTGCTGCTCTTGCATGGGGCGGACATGATG
GCTAAGAACCTGGCGGGAAAGACCCCCACGGACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCATGCCC
TGGAGCATCCCGAGCCAGAATCAGAGCAGAACGGACTGGAGAGGCCTGGGAGTGGCCGTGAGACACCTCA
GCCTATACCAGCCCAGTAA

Translation (332 aa):
MEGTMEGPEAVQRATELIEQRLAQEEETEKLRRSAPGKLSMDMLVLEEEKRLGVQSPALQKVKGQERVRK
TSLDLRREIIDVGGIQNLIELRKKRKQKKRDALAAAQEPPPEPEEITGPVNEETFLKAAVEGKMKVIDKY
LADGGSADTCDEFRRTALHRASLEGHMEILEKLLENGATVDFQDRLDCTAMHWACRGGHLEVVRLLQSRG
ADTNVRDKLLSTPLHVAVRTGHVEIVEHFLSLGLDINAKDREGDSALHDAVRLNRYKIIKLLLLHGADMM
AKNLAGKTPTDLVQLWQADTRHALEHPEPESEQNGLERPGSGRETPQPIPAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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