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Report for CCDS20863.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20863.1 Public Mus musculus 7 Ceacam5 23 108 98 CCDS HistoryNCBI Gene:73250Re-query CCDS DB by CCDS ID:20863.1Re-query CCDS DB by GeneID:73250See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20863.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081907.7 ENSMUSP00000080582.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081907.7Link to Ensembl Protein Viewer:ENSMUSP00000080582.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000081907Re-query CCDS DB by Protein ID:ENSMUSP00000080582
Original member Current member NCBI NM_028480.2 NP_082756.1 Accepted alive Link to Nucleotide Sequence:NM_028480.2Link to Protein Sequence:NP_082756.1Re-query CCDS DB by Nucleotide ID:NM_028480Re-query CCDS DB by Protein ID:NP_082756Link to BLAST:NP_082756.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082756.1 947 Q3UKK2 947 100% 0 0

Chromosomal Locations for CCDS 20863.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 17713447 17713510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17714775 17715134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17745384 17745743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17747114 17747464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17750470 17750829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17752075 17752425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17757553 17757912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17759260 17759613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17760629 17760912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2844 nt):
ATGGAAGCATCCTCTGTCCTTCCATGCAAGTGGTGTACCCACTTGCAGGGGCTTCTGCTCACAGCCTCCT
TTTTAACCTGCTGTCACCTGCCTACCACTGCACAAATAACCATTGAATTAGAGCCACCCCAAGTGATTGA
AGGAGAAAATGTTCTCATACGTGTCAACAATTTGACAGAGAATCTTATAACCTTAGCCTGGTTCAGAGGA
ATGAGGATTAAGAGCCCTCAAATTGGACAATATACACCGGCCACTAAAGTTACTGTGCTGGGTCCTGGTC
ACAGTGGTAGAGAAACTTTGTACAGCAATGGATCCCTGCAGATCTACAATGTCACCCAGGAGGACATAGG
ATTCTACAGCCTACGAATCATAAATAAACATGCAGAAATTGTGTCAATAACATCCATATACCTCAACGTG
TACTCATCTCTATGGACATGTGAGCACCCTTCTCCCCATGCCAAGCTCACCATTGAATCAGTGCCACCCG
GCATTTCTGAAGGGGGAAGTGTTCTTCTACTGGTTAAAAATCTCCCCCAAAATCTTCTATCCCTTTTCTG
GTACAAAGGAGTTATTGCAGTGAAGAAATTTGAGATTGCCAGACACATAAAAGCCACAAATTCAAGTGTT
CCAGGGCCTGCACACACTGGTCGTGAGACAGTATTCAGCAATGGATCCCTTCTGCTACAGGAAGTTATGC
AGAGTGATACTGGATTCTATACTCTACGAACTATGAGTACAGATCTGAAAGATGAAGTAGCACATGTGCA
GCTGTACATGGACACCTATCTTTTGACTTGTTATCACCCTTTGCAAGTCAAGATCGAATCACTTCCTCAG
AATGTTGCTGTAGGGAAAACTGTTCTTCTCTTAGTTCATAATTTGCCTGAAGACTTTCAAGCATTTTTCT
GGTACAAATCAGCATATAGAAGAGATACATACAAAATTGCAGAATACAAGAGAGCCATGGATGCCACCAT
TTTGGGGAGTGCATACAGTTCAAGAGAGTTTATATACAACAACGGATCCATGCTAATAATTGATGTCACT
GAGGATGATGCAGGATATTTCCTGCTAGAAATTTTAAGAGAAGACTTAAAGATTGAAAAAGCCTACATTC
AACTCCATGTAAATAGCTTTGTTTCAAACTCCAAGGACTCTGCCTCCACTGCAAGGCTCAGTATAGAATC
AGTGCCACCGAGCATTGTTGAAGGGGGAAGTGTTCTTTTACTGGTTCACAATCTCCCAAAAAATCTTCAA
TCCCTTTTCTGGTACAAAGGGATGATTGCAGAGAAGAAATCTGAGCTCATACAACACATAATAGCCACAA
GTTCAAGCTTGCCAGGGCCTGCACACAGTGGTCGAGAAACAGTATACAACAATGGATCCCTGCTGCTCCA
GAGGGTCATGCAAAATGATACTCAATTTTATACTCTACAAACTATGGATACAGATCTGAAATATGAAGTA
GCACATGTTCAACTCCAGCTGGACACTTCCCTTTCTACTTGGTATCACCCTTTGCAAGTCAAGATCGAAT
CACTTCCTCGGAATGTTGCTGTAGGAAAAAGTGTTCTTTTTCTGGTTCATAATTTTCCAGAAGTCTTTCG
AGCATTTTCCTGGTATAAACCAGCGTATAAGTCACATACATCCAAAATTGTAGAATACCACAGATTCACG
GATTCTGCCACCGTGGGGGCTGCATACAGAGGAATAGAGGTGATATTCACCAACGGATCCATGGTGATGA
TTGATGTCACTGAGGATGATGCAGGGTTTTACATGCTAGAAATTTTAAGAGAAGACTTCAAAGTTGAAAA
AGCCTATGTTCAACTCCATGTAAATAGCTTTGTTCCAAACTCAAAGGTCTCTGTCTCCACTGCAAGGCTC
AGTATAGAATCAGTGCCCCCCAGCATTGTTGGAGGGGAAAGTGTTCTTCTACTGGTTCACAATCTTCCAA
AAAATCTTCAATCTCTTTTCTGGTACAAAGGCGTGATTGCCGAGGAGAAATCTGAGCTCATCCAACACAT
AATAGCCACAAGTTCAAGCTTGCCAGGGCCTGCACACAGTGGTCGAGAAACAGTGTACAGCAATGGATCC
CTGCTGCTCCAGAGGGTCATGCAGAATGATACTGGATTCTATACTCTACTAACTATGAGTACAGATCTGA
AAGATGAAATAGCACATGTGCAACTCCAGCTGGACACCTCTACTTGCTGTAGCCTTCTCACCTCTGACCA
ACTCATAATTGTACCAGTGCCTCGGAATATTGCTGTAGGGAAAAGTGTTCTTCTCCTTGTTTGCAATGTG
CCAAAGGATGTTCAGACAATTTTCTGGTACAAATCGGTGTATCGAACAGATATTTTTAAAATTGCAGAAT
ATAGCAGATCCATGGAATCTACTATCTGGGGGCTTGCACACAGTGGAAAAGAGATGGTGTACACTAATGG
ATCCCTTCTGATCCAGAATGTCACTGAGCATGATGCAGGATTGTACATGTTAGAAATTTTACATAAGGAC
TACAAACTTGAGAGAGCACATGTGCAAGTCCATGTAAATAACCCTGTTTCATGGCCTTTTGTGCGAGTGA
CTGACACCACAGTCAGAGTACAGAGCTCAGTAGTCTTCACTTGCTTCTCAGCTGACCCTGGTGTCTCCAT
CCGTTGGCTCTTCAATAAGCAGAGTCTGCAGCTCACAGAGAGAATGACACTTTCCCCATCAAAGTGCCAA
CTCAGCATAGATCCTGTCTGGAGGGAGGATGCTGGAAAGTATCAATGTGAGGTCTCCAACCCAGTCAGTT
CAAAGTCCAGTCTCCCAGTCCGTCTGGCTGTGATAGAAGAGTGA

Translation (947 aa):
MEASSVLPCKWCTHLQGLLLTASFLTCCHLPTTAQITIELEPPQVIEGENVLIRVNNLTENLITLAWFRG
MRIKSPQIGQYTPATKVTVLGPGHSGRETLYSNGSLQIYNVTQEDIGFYSLRIINKHAEIVSITSIYLNV
YSSLWTCEHPSPHAKLTIESVPPGISEGGSVLLLVKNLPQNLLSLFWYKGVIAVKKFEIARHIKATNSSV
PGPAHTGRETVFSNGSLLLQEVMQSDTGFYTLRTMSTDLKDEVAHVQLYMDTYLLTCYHPLQVKIESLPQ
NVAVGKTVLLLVHNLPEDFQAFFWYKSAYRRDTYKIAEYKRAMDATILGSAYSSREFIYNNGSMLIIDVT
EDDAGYFLLEILREDLKIEKAYIQLHVNSFVSNSKDSASTARLSIESVPPSIVEGGSVLLLVHNLPKNLQ
SLFWYKGMIAEKKSELIQHIIATSSSLPGPAHSGRETVYNNGSLLLQRVMQNDTQFYTLQTMDTDLKYEV
AHVQLQLDTSLSTWYHPLQVKIESLPRNVAVGKSVLFLVHNFPEVFRAFSWYKPAYKSHTSKIVEYHRFT
DSATVGAAYRGIEVIFTNGSMVMIDVTEDDAGFYMLEILREDFKVEKAYVQLHVNSFVPNSKVSVSTARL
SIESVPPSIVGGESVLLLVHNLPKNLQSLFWYKGVIAEEKSELIQHIIATSSSLPGPAHSGRETVYSNGS
LLLQRVMQNDTGFYTLLTMSTDLKDEIAHVQLQLDTSTCCSLLTSDQLIIVPVPRNIAVGKSVLLLVCNV
PKDVQTIFWYKSVYRTDIFKIAEYSRSMESTIWGLAHSGKEMVYTNGSLLIQNVTEHDAGLYMLEILHKD
YKLERAHVQVHVNNPVSWPFVRVTDTTVRVQSSVVFTCFSADPGVSIRWLFNKQSLQLTERMTLSPSKCQ
LSIDPVWREDAGKYQCEVSNPVSSKSSLPVRLAVIEE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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