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Report for CCDS88835.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88835.1 Public Mus musculus 15 Ccdc65 23 108 98 CCDS HistoryNCBI Gene:105833Re-query CCDS DB by CCDS ID:88835.1Re-query CCDS DB by GeneID:105833See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88835.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000229471.1 ENSMUSP00000155191.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000229471.1Link to Ensembl Protein Viewer:ENSMUSP00000155191.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000229471Re-query CCDS DB by Protein ID:ENSMUSP00000155191
Original member Current member NCBI NM_001364844.1 NP_001351773.1 Accepted alive Link to Nucleotide Sequence:NM_001364844.1Link to Protein Sequence:NP_001351773.1Re-query CCDS DB by Nucleotide ID:NM_001364844Re-query CCDS DB by Protein ID:NP_001351773Link to BLAST:NP_001351773.1

Chromosomal Locations for CCDS 88835.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 98708396 98708536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98709055 98709222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98710779 98710784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (315 nt):
ATGTCTAAAAAAGGAAAAAAGCCCAAGTTGCCCAAGGCACCCCTGTCCGAGGAAGATCAGCTGCTTATAT
TTCAGCAAAAGATGCTGGCTGACGAAGAGGCAGCCAAGAAGAAAGAGAGACTCCTCACCCAGTTCTTGAA
GGACAAGTTGGCCAAAGAAGAACACAACAGCGCTCTAAACCTTAATAAGATTAACACGCAGTGGAGAACC
ATCCTCAGGGAGGTGAAGACCAGAGAGCTTCACCAAGACATCGAGATCCTCAGCCAGACCTTTGAACGCG
TGGTGGACTGTAAGGACAGCGTCATCAAGGTTTAA

Translation (104 aa):
MSKKGKKPKLPKAPLSEEDQLLIFQQKMLADEEAAKKKERLLTQFLKDKLAKEEHNSALNLNKINTQWRT
ILREVKTRELHQDIEILSQTFERVVDCKDSVIKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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