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Report for CCDS1777.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1777.1 Public Homo sapiens 2 DPY30 24 110 108 CCDS HistoryNCBI Gene:84661Re-query CCDS DB by CCDS ID:1777.1Re-query CCDS DB by GeneID:84661See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1777.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295066.3 ENSP00000295066.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000295066.3Link to Ensembl Protein Viewer:ENSP00000295066.3Re-query CCDS DB by Nucleotide ID:ENST00000295066Re-query CCDS DB by Protein ID:ENSP00000295066
Original member Current member EBI ENST00000342166.10 ENSP00000345837.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000342166.10Link to Ensembl Protein Viewer:ENSP00000345837.5Re-query CCDS DB by Nucleotide ID:ENST00000342166Re-query CCDS DB by Protein ID:ENSP00000345837
Original member Current member NCBI NM_001321209.2 NP_001308138.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001321209.2Link to Protein Sequence:NP_001308138.1Re-query CCDS DB by Nucleotide ID:NM_001321209Re-query CCDS DB by Protein ID:NP_001308138Link to BLAST:NP_001308138.1
Original member Current member NCBI NM_032574.4 NP_115963.1 Accepted alive Link to Nucleotide Sequence:NM_032574.4Link to Protein Sequence:NP_115963.1Re-query CCDS DB by Nucleotide ID:NM_032574Re-query CCDS DB by Protein ID:NP_115963Link to BLAST:NP_115963.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308138.1 99 Q9C005 99 100% 0 0
NP_115963.1 99 Q9C005 99 100% 0 0

Chromosomal Locations for CCDS 1777.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 32024184 32024256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32029594 32029736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32039279 32039326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32039421 32039456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (300 nt):
ATGGAGCCAGAGCAGATGCTGGAGGGACAAACGCAGGTTGCAGAAAATCCTCACTCTGAGTACGGTCTCA
CAGACAACGTTGAGAGAATAGTAGAAAATGAGAAGATTAATGCAGAAAAGTCATCAAAGCAGAAGGTAGA
TCTCCAGTCTTTGCCAACTCGTGCCTACCTGGATCAGACAGTTGTGCCTATCTTATTACAGGGACTTGCT
GTGCTTGCAAAGGAAAGACCACCAAATCCCATTGAATTTCTAGCATCTTATCTTTTAAAAAACAAGGCAC
AGTTTGAAGATCGAAACTGA

Translation (99 aa):
MEPEQMLEGQTQVAENPHSEYGLTDNVERIVENEKINAEKSSKQKVDLQSLPTRAYLDQTVVPILLQGLA
VLAKERPPNPIEFLASYLLKNKAQFEDRN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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