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Report for CCDS1486.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1486.1 Public Homo sapiens 1 CAMK1G 24 110 108 CCDS HistoryNCBI Gene:57172Re-query CCDS DB by CCDS ID:1486.1Re-query CCDS DB by GeneID:57172See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1486.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000009105.5 ENSP00000009105.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000009105.5Link to Ensembl Protein Viewer:ENSP00000009105.1Re-query CCDS DB by Nucleotide ID:ENST00000009105Re-query CCDS DB by Protein ID:ENSP00000009105
Original member Current member EBI ENST00000361322.3 ENSP00000354861.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361322.3Link to Ensembl Protein Viewer:ENSP00000354861.2Re-query CCDS DB by Nucleotide ID:ENST00000361322Re-query CCDS DB by Protein ID:ENSP00000354861
Original member Current member NCBI NM_020439.3 NP_065172.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020439.3Link to Protein Sequence:NP_065172.1Re-query CCDS DB by Nucleotide ID:NM_020439Re-query CCDS DB by Protein ID:NP_065172Link to BLAST:NP_065172.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065172.1 476 Q96NX5-1 476 100% 0 0

Chromosomal Locations for CCDS 1486.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 209594984 209595075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 209599983 209600111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 209603214 209603288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 209605536 209605674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 209606320 209606443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 209607858 209607933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 209608980 209609092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 209609851 209609929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 209611465 209611552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 209611792 209612216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 209612785 209612875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1431 nt):
ATGGGTCGAAAGGAAGAAGATGACTGCAGTTCCTGGAAGAAACAGACCACCAACATCCGGAAAACCTTCA
TT
TTTATGGAAGTGCTGGGATCAGGAGCTTTCTCAGAAGTTTTCCTGGTGAAGCAAAGACTGACTGGGAA
G
CTCTTTGCTCTGAAGTGCATCAAGAAGTCACCTGCCTTCCGGGACAGCAGCCTGGAGAATGAGATTGCT
GTG
TTGAAAAAGATCAAGCATGAAAACATTGTGACCCTGGAGGACATCTATGAGAGCACCACCCACTACT
AC
CTGGTCATGCAGCTTGTTTCTGGTGGGGAGCTCTTTGACCGGATCCTGGAGCGGGGTGTCTACACAGA
G
AAGGATGCCAGTCTGGTGATCCAGCAGGTCTTGTCGGCAGTGAAATACCTACATGAGAATGGCATCGTC
CAC
AGAGACTTAAAGCCCGAAAACCTGCTTTACCTTACCCCTGAAGAGAACTCTAAGATCATGATCACTG
AC
TTTGGTCTGTCCAAGATGGAACAGAATGGCATCATGTCCACTGCCTGTGGGACCCCAGGCTACGTGGC
T
CCAGAAGTGCTGGCCCAGAAACCCTACAGCAAGGCTGTGGATTGCTGGTCCATCGGCGTCATCACCTAC
ATA
TTGCTCTGTGGATACCCCCCATTCTATGAAGAAACGGAGTCTAAGCTTTTCGAGAAGATCAAGGAGG
GC
TACTATGAGTTTGAGTCTCCATTCTGGGATGACATTTCTGAGTCAGCCAAGGACTTTATTTGCCACTT
G
CTTGAGAAGGATCCGAACGAGCGGTACACCTGTGAGAAGGCCTTGAGTCATCCCTGGATTGACGGAAAC
ACA
GCCCTCCACCGGGACATCTACCCATCAGTCAGCCTCCAGATCCAGAAGAACTTTGCTAAGAGCAAGT
GG
AGGCAAGCCTTCAACGCAGCAGCTGTGGTGCACCACATGAGGAAGCTACACATGAACCTGCACAGCCC
G
GGCGTCCGCCCAGAGGTGGAGAACAGGCCGCCTGAAACTCAAGCCTCAGAAACCTCTAGACCCAGCTCC
CCT
GAGATCACCATCACCGAGGCACCTGTCCTGGACCACAGTGTAGCACTCCCTGCCCTGACCCAATTAC
CC
TGCCAGCATGGCCGCCGGCCCACTGCCCCTGGTGGCAGGTCCCTCAACTGCCTGGTCAATGGCTCCCT
C
CACATCAGCAGCAGCCTGGTGCCCATGCATCAGGGGTCCCTGGCCGCCGGGCCCTGTGGCTGCTGCTCC
AGC
TGCCTGAACATTGGGAGCAAAGGAAAGTCCTCCTACTGCTCTGAGCCCACACTCCTCAAAAAGGCCA
AC
AAAAAACAGAACTTCAAGTCGGAGGTCATGGTACCAGTTAAAGCCAGTGGCAGCTCCCACTGCCGGGC
A
GGGCAGACTGGAGTCTGTCTCATTATGTGA


Translation (476 aa):
MGRKEEDDCSSWKKQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIA
V
LK
KIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIV
H
RDLK
PENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITY
I
LLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN
T
ALHRDIYPSVSLQIQKNFAKSKWR
QAFNAAAVVHHMRKLHMNLHSPGVRPEVENRPPETQASETSRPSS
P
EITITEAPVLDHSVALPALTQLPCQHGRRPTAPGGRSLNCLVNGSLHISSSLVPMHQGSLAAGPCGCCS
S
CLNIGSKGKSSYCSEPTLLKKANKK
QNFKSEVMVPVKASGSSHCRAGQTGVCLIM



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser