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Report for CCDS27937.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27937.1 Public Mus musculus 16 Tmem114 23 108 98 CCDS HistoryNCBI Gene:74720Re-query CCDS DB by CCDS ID:27937.1Re-query CCDS DB by GeneID:74720See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27937.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023400.3 ENSMUSP00000023400.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023400.3Link to Ensembl Protein Viewer:ENSMUSP00000023400.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000023400Re-query CCDS DB by Protein ID:ENSMUSP00000023400
Original member Current member NCBI NM_029070.2 NP_083346.1 Accepted alive Link to Nucleotide Sequence:NM_029070.2Link to Protein Sequence:NP_083346.1Re-query CCDS DB by Nucleotide ID:NM_029070Re-query CCDS DB by Protein ID:NP_083346Link to BLAST:NP_083346.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083346.1 222 Q9D563 222 100% 0 0

Chromosomal Locations for CCDS 27937.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 8409529 8409761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8412101 8412238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8424063 8424143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8424436 8424652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (669 nt):
ATGCGGGTGCGCCTGGGCGCTCTGGCGGGAGCGGCGGCGCTGAGCGGGGCTCTGAGCTTCGTGCTGCTGG
CAGCAGCCATCGGCACCGACTTCTGGTACATCATCGACACCGAGAGGCTGGAAAGGAGCAGCCAGAGGAT
GAGGGACCAGGGACCGGCCAACCGCAGCCAGCAAGAGCCTCTGAGCTCCCACTCGGGACTCTGGAGAACT
TGCCGGGTCCAGAGCTCCTGCACGCCGTTGATGAACCCTTTCTGGCAGGAGAATGTGACGGTCAGCGACT
CCAGCAGACAGCTTCTCACTATGCACGGGACATTCGTGATCTTATTGCCACTCAGTCTGATCGTGATGGT
GTTTGGGGGGATGACCGGGTTCTTGAGCTTCCTCCTCCGAGCTCACCTCCTTCTGCTGCTCACCGGGATC
CTCTTTCTCTTTGGAGCCATGGTGACCCTCACTGGAATCAGCATCTACATTGCGTACTCAGCAGTTGCCT
TCCGAGAGGCAGTATGCCTCCTGGAGGAGAGGGCCCTGCTGGATCAGGTGGATATACGCTTTGGCTGGTC
TCTGGCCCTCGGCTGGATTAGCTTTGTATCTGAGCTGCTCACTGGGGTGGTCTTCCTGGCAGCGGCGCGT
GCGCTCAGCCTGAGCCAGAGGCAGGACCAAGCCATCTGA

Translation (222 aa):
MRVRLGALAGAAALSGALSFVLLAAAIGTDFWYIIDTERLERSSQRMRDQGPANRSQQEPLSSHSGLWRT
CRVQSSCTPLMNPFWQENVTVSDSSRQLLTMHGTFVILLPLSLIVMVFGGMTGFLSFLLRAHLLLLLTGI
LFLFGAMVTLTGISIYIAYSAVAFREAVCLLEERALLDQVDIRFGWSLALGWISFVSELLTGVVFLAAAR
ALSLSQRQDQAI


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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