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Report for CCDS2429.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2429.1 Public Homo sapiens 2 CRYBA2 24 110 108 CCDS HistoryNCBI Gene:1412Re-query CCDS DB by CCDS ID:2429.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2429.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295728.7 ENSP00000295728.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295728.7Link to Ensembl Protein Viewer:ENSP00000295728.2Re-query CCDS DB by Nucleotide ID:ENST00000295728Re-query CCDS DB by Protein ID:ENSP00000295728
Original member Current member EBI ENST00000392096.6 ENSP00000375946.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392096.6Link to Ensembl Protein Viewer:ENSP00000375946.2Re-query CCDS DB by Nucleotide ID:ENST00000392096Re-query CCDS DB by Protein ID:ENSP00000375946
Original member Current member NCBI NM_057093.2 NP_476434.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_057093.2Link to Protein Sequence:NP_476434.1Re-query CCDS DB by Nucleotide ID:NM_057093Re-query CCDS DB by Protein ID:NP_476434Link to BLAST:NP_476434.1
Original member Current member NCBI NM_057094.2 NP_476435.1 Accepted alive Link to Nucleotide Sequence:NM_057094.2Link to Protein Sequence:NP_476435.1Re-query CCDS DB by Nucleotide ID:NM_057094Re-query CCDS DB by Protein ID:NP_476435Link to BLAST:NP_476435.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_476434.1 197 P53672 197 100% 0 0
NP_476435.1 197 P53672 197 100% 0 0

Chromosomal Locations for CCDS 2429.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 218990252 218990399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218990852 218990994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218992102 218992243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218993016 218993176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (594 nt):
ATGAGCAGCGCCCCCGCGCCGGGCCCGGCGCCCGCCAGCCTCACGCTCTGGGACGAGGAGGACTTCCAGG
GCCGTCGCTGTCGGCTGCTAAGCGACTGTGCGAACGTCTGCGAGCGCGGAGGCCTGCCCAGGGTGCGCTC
GGTCAAGGTGGAAAACGGCGTTTGGGTGGCCTTTGAGTACCCCGACTTCCAGGGACAGCAGTTCATTCTG
GAGAAGGGAGACTATCCTCGCTGGAGCGCCTGGAGTGGCAGCAGCAGCCACAACAGCAACCAGCTGCTGT
CCTTCCGGCCAGTGCTCTGCGCGAACCACAATGACAGCCGTGTGACACTGTTTGAGGGGGACAACTTCCA
AGGCTGCAAGTTTGACCTCGTTGATGACTACCCATCCCTGCCCTCCATGGGCTGGGCCAGCAAGGATGTG
GGTTCCCTCAAAGTCAGCTCCGGAGCGTGGGTGGCCTACCAGTACCCAGGCTACCGAGGCTACCAGTATG
TGTTGGAGCGGGACCGGCACAGCGGAGAGTTCTGTACTTACGGTGAGCTCGGCACACAGGCCCACACTGG
GCAGCTGCAGTCCATCCGGAGAGTCCAGCACTAG

Translation (197 aa):
MSSAPAPGPAPASLTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFIL
EKGDYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDV
GSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGELGTQAHTGQLQSIRRVQH


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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