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Report for CCDS9262.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9262.1 Public Homo sapiens 12 BRI3BP 24 110 108 CCDS HistoryNCBI Gene:140707Re-query CCDS DB by CCDS ID:9262.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9262.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341446.9 ENSP00000340761.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341446.9Link to Ensembl Protein Viewer:ENSP00000340761.7Re-query CCDS DB by Nucleotide ID:ENST00000341446Re-query CCDS DB by Protein ID:ENSP00000340761
Original member Current member EBI ENST00000672415.1 ENSP00000500359.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000672415.1Link to Ensembl Protein Viewer:ENSP00000500359.1Re-query CCDS DB by Nucleotide ID:ENST00000672415Re-query CCDS DB by Protein ID:ENSP00000500359
Original member Current member NCBI NM_080626.6 NP_542193.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_080626.6Link to Protein Sequence:NP_542193.3Re-query CCDS DB by Nucleotide ID:NM_080626Re-query CCDS DB by Protein ID:NP_542193Link to BLAST:NP_542193.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_542193.3 251 Q8WY22 251 100% 0 0

Chromosomal Locations for CCDS 9262.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 124993791 124994003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 125012534 125012636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 125024991 125025430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (756 nt):
ATGGGCGCGCGCGCCTCAGGCGGGCCCCTGGCCCGGGCCGGGCTCCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTCGGGCTGCTGGCCCCGGGCGCGCAGGGGGCGCGGGGCCGCGGCGGCGCGGAGAAGAACAGCTACCG
CCGCACGGTCAACACCTTCTCCCAGAGCGTCAGCAGCCTGTTCGGCGAGGACAACGTGCGCGCCGCTCAG
AAGTTCTTGGCCAGGCTGACTGAGAGATTTGTGCTGGGAGTGGATATGTTCGTGGAGACACTGTGGAAAG
TCTGGACCGAGCTCTTGGATGTTCTTGGACTTGACGTCTCCAACCTGTCCCAGTATTTCAGCCCAGCCTC
GGTGTCCAGCAGCCCGGCCCGCGCGCTCCTGCTGGTCGGCGTCGTCCTCCTGGCCTACTGGTTCTTGTCC
CTGACCCTGGGCTTCACTTTCAGCGTCCTGCACGTGGTGTTCGGCCGCTTCTTCTGGATCGTGCGGGTCG
TCCTGTTTTCCATGTCCTGCGTGTACATCCTGCACAAGTACGAGGGCGAGCCGGAGAACGCGGTGCTGCC
GCTGTGCTTCGTGGTGGCCGTCTACTTCATGACCGGGCCCATGGGCTTCTACTGGCGAAGCAGTCCCAGC
GGCCCCAGCAACCCCAGCAACCCCAGCGTGGAGGAGAAGCTGGAGCACCTGGAGAAGCAGGTCAGACTGC
TCAACATCCGTCTCAACCGGGTGCTCGAGAGCCTGGACCGCTCCAAGGACAAGTGA

Translation (251 aa):
MGARASGGPLARAGLLLLLLLLLLLGLLAPGAQGARGRGGAEKNSYRRTVNTFSQSVSSLFGEDNVRAAQ
KFLARLTERFVLGVDMFVETLWKVWTELLDVLGLDVSNLSQYFSPASVSSSPARALLLVGVVLLAYWFLS
LTLGFTFSVLHVVFGRFFWIVRVVLFSMSCVYILHKYEGEPENAVLPLCFVVAVYFMTGPMGFYWRSSPS
GPSNPSNPSVEEKLEHLEKQVRLLNIRLNRVLESLDRSKDK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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