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Report for CCDS22276.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22276.1 Public Mus musculus 8 Cyp4v3 23 108 98 CCDS HistoryNCBI Gene:102294Re-query CCDS DB by CCDS ID:22276.1Re-query CCDS DB by GeneID:102294See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22276.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095328.5 ENSMUSP00000092966.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095328.5Link to Ensembl Protein Viewer:ENSMUSP00000092966.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000095328Re-query CCDS DB by Protein ID:ENSMUSP00000092966
Original member Current member NCBI NM_133969.3 NP_598730.1 Accepted alive Link to Nucleotide Sequence:NM_133969.3Link to Protein Sequence:NP_598730.1Re-query CCDS DB by Nucleotide ID:NM_133969Re-query CCDS DB by Protein ID:NP_598730Link to BLAST:NP_598730.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598730.1 525 Q9DBW0 525 100% 0 0

Chromosomal Locations for CCDS 22276.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 45306936 45307108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 45308380 45308559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 45308657 45308791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 45310183 45310285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 45315535 45315720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 45317667 45317793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 45320091 45320160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 45320527 45320717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 45321703 45321788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 45328113 45328225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 45332765 45332978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1578 nt):
ATGTTGTGGCTGTGGTTAGGGCTCAGTGGGCAGAAACTATTGCTTTGGGGCGCAGCGAGCGCGGTCTCCC
TGGCCGGCGCCACTATCCTGATCAGCATCTTTCCGATGCTGGTAAGCTACGCGCGGAAATGGCAGCAGAT
GCGGTCAATCCCGTCGGTGGCCCGCGCCTACCCCTTGGTGGGACACGCGCTTTATATGAAGCCCAACAAC
GCAGAATTTTTTCAGCAGCTAATTTATTACACAGAAGAATTTCGACACCTGCCGATCATTAAACTTTGGA
TTGGACCCGTGCCCCTGGTGGCACTTTATAAGGCAGAGAATGTGGAGGTGATTTTGACCAGTTCTAAGCA
AATTGATAAATCGTTTTTGTACAAGTTCCTACAGCCATGGCTGGGACTAGGACTTCTTACAAGTACGGGG
AGCAAATGGCGCACCAGGAGGAAGATGCTAACGCCCACTTTCCATTTTACCATTCTGGAGAACTTCTTGG
ATGTCATGAATGAGCAAGCAAATATATTGGTTAATAAGCTTGAAAAACACGTCAACCAAGAAGCCTTTAA
TTGTTTTTTTTACATCACTCTTTGTGCTCTGGATATAATCTGTGAAACGGCTATGGGGAAGAACATCGGA
GCTCAAAGCAATAATGATTCCGAGTATGTCCGTACAGTGTATAGGATGAGTGATATGATATATAGAAGAA
TGAAGATGCCCTGGCTTTGGTTTGACCTTTGGTACCTTGTGTTTAAAGAAGGACGGGACCACAAAAGGGG
ACTCAAATGCCTACATACTTTCACCAACAATGTCATTGCTGAACGAGTCAAAGAAAGGAAGGCAGAGGAA
GACTGGACGGGTGCTGGCAGGGGTCCTATCCCCTCCAAAAATAAGCGCAAGGCTTTCCTTGACTTGCTTT
TGAGTGTGACTGATGAGGAAGGAAACAGATTAAGCCAGGAAGACATCCGAGAGGAAGTTGACACCTTCAT
GTTTGAGGGTCACGATACAACTGCTGCTGCAATCAACTGGTCCTTATACCTATTGGGCACGAATCCAGAA
GTCCAGAGGAAAGTGGATCAGGAGCTGGATGAAGTGTTTGGAAGATCCCATCGTCCTGTCACCTTGGAAG
ACCTGAAGAAACTTAAATATTTGGATTGCGTCATTAAGGAGACTCTCCGAGTTTTCCCATCTGTCCCTTT
ATTTGCCCGGAGTCTTAGCGAGGACTGTGAAGTGGGCGGTTACAAAGTCACAAAAGGAACGGAAGCAATC
ATCATTCCCTACGCACTACACCGAGACCCCAGATACTTCCCAGATCCAGAGGAATTCCGACCAGAGCGGT
TCTTTCCTGAAAATTCCCAAGGACGCCATCCCTATGCCTATGTGCCATTTTCTGCTGGACCTCGAAACTG
TATTGGTCAAAAGTTTGCTGTCATGGAGGAGAAGACCATTCTTGCCTGTATCCTGAGGCAGTTTTGGGTA
GAATCCAACCAGAAGAGAGAAGAACTCGGCCTGGCTGGAGATTTGATTCTTAGGCCAAATAATGGCATCT
GGATCAAGCTGAAGAGGAGACATGAAGATGACCCCTAA

Translation (525 aa):
MLWLWLGLSGQKLLLWGAASAVSLAGATILISIFPMLVSYARKWQQMRSIPSVARAYPLVGHALYMKPNN
AEFFQQLIYYTEEFRHLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDKSFLYKFLQPWLGLGLLTSTG
SKWRTRRKMLTPTFHFTILENFLDVMNEQANILVNKLEKHVNQEAFNCFFYITLCALDIICETAMGKNIG
AQSNNDSEYVRTVYRMSDMIYRRMKMPWLWFDLWYLVFKEGRDHKRGLKCLHTFTNNVIAERVKERKAEE
DWTGAGRGPIPSKNKRKAFLDLLLSVTDEEGNRLSQEDIREEVDTFMFEGHDTTAAAINWSLYLLGTNPE
VQRKVDQELDEVFGRSHRPVTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVGGYKVTKGTEAI
IIPYALHRDPRYFPDPEEFRPERFFPENSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILRQFWV
ESNQKREELGLAGDLILRPNNGIWIKLKRRHEDDP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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