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Report for CCDS23126.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23126.1 Public Mus musculus 9 Mpzl2 23 108 98 CCDS HistoryNCBI Gene:14012Re-query CCDS DB by CCDS ID:23126.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23126.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034600.4 ENSMUSP00000034600.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034600.4Link to Ensembl Protein Viewer:ENSMUSP00000034600.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000034600Re-query CCDS DB by Protein ID:ENSMUSP00000034600
Original member Current member NCBI NM_001357727.1 NP_001344656.1 Accepted alive Link to Nucleotide Sequence:NM_001357727.1Link to Protein Sequence:NP_001344656.1Re-query CCDS DB by Nucleotide ID:NM_001357727Re-query CCDS DB by Protein ID:NP_001344656Link to BLAST:NP_001344656.1
Original member Current member NCBI NM_007962.4 NP_031988.2 Accepted alive Link to Nucleotide Sequence:NM_007962.4Link to Protein Sequence:NP_031988.2Re-query CCDS DB by Nucleotide ID:NM_007962Re-query CCDS DB by Protein ID:NP_031988Link to BLAST:NP_031988.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344656.1 215 O70255 215 99.5349% 0 1
NP_031988.2 215 O70255 215 99.5349% 0 1

Chromosomal Locations for CCDS 23126.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 45042737 45042794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45043700 45043866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45044153 45044363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45047164 45047311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 45049652 45049715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (648 nt):
ATGTATGGCAAGAGCCCCGCGCTTGTGCTTCCACTTCTCCTGAGTTTACAGCTCACAGCCCTTTGTCCTA
CAGAAGCTGTGGAAATTTACACCTCCGGGGCCCTGGAGGCAGTCAACGGGACAGATGTTCGGTTAAAATG
CACTTTCTCCAGCTTTGCCCCTGTGGGAGATGCGCTAACTGTGACGTGGAATTTCCGACCTCGAGATGGG
GGTCGTGAGCAGTTTGTATTCTACTACCACATGGACCCCTTCAGGCCCATGAGCGGACGGTTCAAAGACC
GGGTGGTCTGGGACGGAAACCCCGAGCGATATGACGTCTCCATCTTGCTCTGGAAGCTGCAGTTTGACGA
CAATGGGACATACACCTGCCAGGTGAAGAATCCACCTGATGTTGATGGTCTGGTTGGGACGATCCGGCTC
AGCGTTGTGCACACTGTGCCCTTCTCTGAGATCTACTTCCTGGCCGTGGCCATTGGCTCTGCGTGCGCAC
TGATGATCATCGTAGTGATCGTGGTAGTCCTCTTCCAGCACTTCCGGAAAAAGCGATGGGCGGACAGTGC
TGATAAAGCCGAGGGGACAAAATCAAAAGAAGAGGAAAAACTCAACCAAGGAAACAAGGTCTCTGTTTTT
GTGGAAGATACAGACTAA

Translation (215 aa):
MYGKSPALVLPLLLSLQLTALCPTEAVEIYTSGALEAVNGTDVRLKCTFSSFAPVGDALTVTWNFRPRDG
GREQFVFYYHMDPFRPMSGRFKDRVVWDGNPERYDVSILLWKLQFDDNGTYTCQVKNPPDVDGLVGTIRL
SVVHTVPFSEIYFLAVAIGSACALMIIVVIVVVLFQHFRKKRWADSADKAEGTKSKEEEKLNQGNKVSVF
VEDTD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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