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Report for CCDS87732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87732.1 Public Homo sapiens X PPP4R3C 24 110 108 CCDS HistoryNCBI Gene:139420Re-query CCDS DB by CCDS ID:87732.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87732.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000412172.4 ENSP00000489770.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000412172.4Link to Ensembl Protein Viewer:ENSP00000489770.1Re-query CCDS DB by Nucleotide ID:ENST00000412172Re-query CCDS DB by Protein ID:ENSP00000489770
Original member Current member NCBI NM_207319.4 NP_997202.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207319.4Link to Protein Sequence:NP_997202.3Re-query CCDS DB by Nucleotide ID:NM_207319Re-query CCDS DB by Protein ID:NP_997202Link to BLAST:NP_997202.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997202.3 832 Q6ZMV5-1 832 100% 0 0

Chromosomal Locations for CCDS 87732.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 27460798 27463296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2499 nt):
ATGGCAGGCCTGAGGTACAGTGTAAAAGTCTATGTCCTGAACGAAGACGAGGAATGGAACAATCTAGGCA
CCGGTCAGGTCTCATCCACCTATGACGAGCAGTTCCAGGGCATGTCGCTGCTTGTTCGGTCAGATTCAGA
TGGGTCGGTCATCCTGCGGTCACAGATACCTCCAGACAGGCCCTATGGGAAATACCAAGAGACACTAATT
GTTTGGTATGAAGCTGAGAACCAGGGTTTGGTGCTAAAATTCCAGGACCCAGCCGGCTGCCAGGATATTT
GGAAAGAAATTTGCCAAGCTCAAGGTAAGGATCCGTCTATCCAAACCACAGTGAACATTTCAGATGAACC
AGAGGAAGACTTTAATGAAATGTCAGTAATTAGTAATATGGTTGTGCTGCCTGACTGTGAACTCAATACA
CTTGATCAAATTGCTGACATAGTTACCTCAGTTTTCTCGTCACCTGTTACGGATAGGGAAAGACTGGCTG
AGATCTTGAAAAATGAGGCTTATATTCCAAAACTACTGCAACTGTTCCACACTTGTGAAAATCTAGAGAA
TACTGAAGGTTTACACCATTTGTATGAAATTATTAAGGGAATTTTGTTCCTCAACGAGGCATGTCTGTTT
GAGATAATGTTTTCTGACGAGTGTATCATGGATGTGGTGGGATGCCTTGAGTATGACCCTGCTTTGGATC
AGCCAAAAAGGCATAGGGACTTCTTGACCAACGATGCGAAGTTCAAGGAAGTTATACCAATAACTAACTC
TGAACTTAGGCAAAAAATACATCAGACATACAGATTACAGTACATTTATGACATTCTTTTGCCTGTGCCT
TCCATATTTGAAGATAATTTTCTTTCTACACTTACAACTTTTATTTTCTCCAACAAGGCTGAGATAGTAA
GCATGCTGCAGAAAGATCACAAATTTTTGTATGAAGTTTTTGCACAGTTAAAGGATGAGACTACACATGA
TGATAGACGGTGTGAATTGCTATTTTTTTTCAAGGAGTTATGTTCATTTTCTCAGGCATTACAGCCTCAA
AGCAAGGATGCACTATTTGAAACGTTGATACAGTTGGGAGTTCTTCCTGCTCTTAAAATCGTAATGATCA
GGGATGATTTGCAAGTAAGGTCAGCTGCTGCAGTTATATGTGCTTATCTAGTGGAGTACAGTCCATCCAG
GATCCGAGAATTTATAATTTCAGAAGCTCACGTGTGCAAAGATAGTGACCTTTTCATTAATGTAATAATT
AAACAAATGATCTGTGATACTGATCCTGAGTTAGGAGGTGCTGTTCATTTGATGGTAGTTCTGCATACTC
TACTTGATCCACGCAACATGCTGACAACACCTGAGAAAAGTGAAAGAAGTGAATTTCTACATTTCTTCTA
CAAACATTGCATGCATAAATTTACAGCACCACTTTTGGCTGCCACCTCAGAACACAACTGTGAGGAGGAT
GATATAGCTGGATATGACAAAAGCAAAAATTGCCCCAATGATAATCAAACAGCACAACTGCTTGCTTTGA
TATTAGAGCTACTTACATTTTGTATACAACATCATACATTCTACATAAGAAGCTATATCTTGAACAAAGA
CTTGCTAAGAAAGGCCTTGATATTGATGAATTCAAAGCATACTCACCTGATTTTGTGTGTTCTTCGCTTT
ATGAGAAGGATGATTTGCCTTAATGATGAAGCTTATAATAATTACATCATCAAGGGAAATCTTTTTGAGC
CAGTTGTAAATGCTCTTCTAGATAATGGAACTCGGTACAATATGTTGAATTCAGCTATTCTTGAGCTATT
TGAATACATAAGAGTGGAAAATATCAAGCCTCTTGTTTCACATATAGTTGAAAAGTTTTATAACACACTT
GAATCGATTGAATATGTTCAGACATTCAAAGGATTGAAGATTAAATATGAAAAAGAGAGAGACAGACAAA
GTCAAATACAAAAGAATTTACATTCTGTACTGCAAAATATAGTAGTTTTCAGAGGTACCATAGAAGAAAT
TGGGCTGGAAGAAGAAATATGTTTTATGGAAGATGCAGGAGAAGTAGTTATGCCACCACTGGAAGATGAC
GATGAATTTATGGAGACCAAAAGAACCCAAGAAGGAGAAGCAGTTATGCCACCACTGGAAGATGACGATA
AATTTACGGAGACCAAAAGAACCCACCAAGAAGGAGAAGCAGTTATGCCACCACTGGAAGATGACGATGA
ATTTATGGAGACTAAAAGAAACCAAGAACATGAAGGCAAGGTAGACTCTCCCAAAAGAACATCTTCTGGT
GACTTCAAATTCTCTTCATCTTATTCTGCTTGTGCTGCTATTGGAACAGGTAGCCCAAGTGGTAGCAGTG
TGGTTCGTTTAGTGGATCATCCAGATGATGAAGAAGAAAAAGAGGAAGATGAAGAAGAAAAAGAGGAAGA
TAAAGAAGATGAAACATCCCCCAAGAAGAAACCTCATCTTAGCTCCTAA

Translation (832 aa):
MAGLRYSVKVYVLNEDEEWNNLGTGQVSSTYDEQFQGMSLLVRSDSDGSVILRSQIPPDRPYGKYQETLI
VWYEAENQGLVLKFQDPAGCQDIWKEICQAQGKDPSIQTTVNISDEPEEDFNEMSVISNMVVLPDCELNT
LDQIADIVTSVFSSPVTDRERLAEILKNEAYIPKLLQLFHTCENLENTEGLHHLYEIIKGILFLNEACLF
EIMFSDECIMDVVGCLEYDPALDQPKRHRDFLTNDAKFKEVIPITNSELRQKIHQTYRLQYIYDILLPVP
SIFEDNFLSTLTTFIFSNKAEIVSMLQKDHKFLYEVFAQLKDETTHDDRRCELLFFFKELCSFSQALQPQ
SKDALFETLIQLGVLPALKIVMIRDDLQVRSAAAVICAYLVEYSPSRIREFIISEAHVCKDSDLFINVII
KQMICDTDPELGGAVHLMVVLHTLLDPRNMLTTPEKSERSEFLHFFYKHCMHKFTAPLLAATSEHNCEED
DIAGYDKSKNCPNDNQTAQLLALILELLTFCIQHHTFYIRSYILNKDLLRKALILMNSKHTHLILCVLRF
MRRMICLNDEAYNNYIIKGNLFEPVVNALLDNGTRYNMLNSAILELFEYIRVENIKPLVSHIVEKFYNTL
ESIEYVQTFKGLKIKYEKERDRQSQIQKNLHSVLQNIVVFRGTIEEIGLEEEICFMEDAGEVVMPPLEDD
DEFMETKRTQEGEAVMPPLEDDDKFTETKRTHQEGEAVMPPLEDDDEFMETKRNQEHEGKVDSPKRTSSG
DFKFSSSYSACAAIGTGSPSGSSVVRLVDHPDDEEEKEEDEEEKEEDKEDETSPKKKPHLSS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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