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Report for CCDS13789.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13789.1 Public Homo sapiens 22 HIC2 24 110 108 CCDS HistoryNCBI Gene:23119Re-query CCDS DB by CCDS ID:13789.1Re-query CCDS DB by GeneID:23119See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13789.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000407598.2 ENSP00000384889.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407598.2Link to Ensembl Protein Viewer:ENSP00000384889.2Re-query CCDS DB by Nucleotide ID:ENST00000407598Re-query CCDS DB by Protein ID:ENSP00000384889
Original member Current member EBI ENST00000407464.7 ENSP00000385319.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000407464.7Link to Ensembl Protein Viewer:ENSP00000385319.2Re-query CCDS DB by Nucleotide ID:ENST00000407464Re-query CCDS DB by Protein ID:ENSP00000385319
Original member Current member EBI ENST00000443632.2 ENSP00000387757.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000443632.2Link to Ensembl Protein Viewer:ENSP00000387757.2Re-query CCDS DB by Nucleotide ID:ENST00000443632Re-query CCDS DB by Protein ID:ENSP00000387757
Original member Current member NCBI NM_015094.3 NP_055909.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015094.3Link to Protein Sequence:NP_055909.2Re-query CCDS DB by Nucleotide ID:NM_015094Re-query CCDS DB by Protein ID:NP_055909Link to BLAST:NP_055909.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055909.2 615 Q96JB3-1 615 100% 0 0

Chromosomal Locations for CCDS 13789.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 21442832 21442857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21444922 21446743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1848 nt):
ATGGTGTCTGGGCCCTTGGCACTCCGGTGGTGCGCGTGGGCAGGGCGCGGGGACATGGGGCCCGACATGG
AGCTGCCCAGCCACTCGAAGCAGCTCCTGCTGCAGCTGAACCAGCAGAGGACCAAGGGCTTCCTGTGTGA
CGTCATCATCATGGTGGAGAACTCCATCTTCCGGGCCCACAAGAACGTCCTAGCCGCCAGCAGCATCTAT
TTCAAGTCCCTGGTCCTGCACGACAACCTCATCAACCTGGACACAGACATGGTCAGCTCCACAGTGTTCC
AGCAGATCTTGGACTTCATCTACACAGGCAAGCTGCTGCCCAGCGACCAGCCAGCCGAGCCCAACTTCAG
CACCCTCCTCACTGCCGCCAGCTACCTCCAGCTGCCCGAGTTGGCAGCCCTCTGCCGCCGCAAACTCAAG
CGAGCCGGCAAGCCCTTTGGCTCTGGGAGGGCGGGGTCCACTGGCATGGGGCGGCCCCCCCGCAGCCAGC
GGCTGTCCACGGCCTCTGTCATCCAAGCTCGGTATCAGGGGCTCGTGGATGGGCGCAAGGGGGCCCACGC
CCCCCAGGAGCTCCCCCAAGCCAAAGGCTCAGACGATGAACTCTTTCTTGGTGGCTCTAACCAGGATAGC
GTGCAAGGTCTGGGCCGGGCTGTCTGCCCAGCTGGCGGGGAGGCGGGTCTGGGGGGCTGCAGCAGCAGCA
CCAACGGGAGCAGCGGGGGCTGCGAGCAGGAGCTGGGCTTGGACCTGTCCAAGAAAAGCCCACCCTTGCC
CCCTGCCACCCCAGGTCCCCACCTCACTCCCGATGACGCAGCCCAGCTGAGCGACAGCCAACATGGCTCG
CCCCCTGCGGCCTCTGCTCCTCCCGTTGCCAACAGTGCCTCTTATTCTGAGCTGGGGGGCACCCCTGATG
AGCCCATGGATCTGGAGGGGGCCGAGGACAACCACCTGAGCCTGCTGGAGGCGCCTGGTGGGCAGCCTCG
GAAGAGCCTCCGGCACTCCACTCGGAAGAAGGAGTGGGGCAAGAAGGAGCCTGTGGCTGGCTCCCCCTTT
GAGCGGAGAGAAGCAGGGCCCAAGGGTCCCTGCCCGGGAGAGGAGGGTGAGGGGGTCGGGGACAGGGTTC
CCAATGGCATCCTGGCTAGTGGGGCTGGCCCTAGCGGGCCCTATGGGGAGCCCCCCTACCCCTGCAAGGA
GGAGGAGGAGAACGGCAAGGATGCAAGTGAAGACAGTGCGCAGAGCGGGAGCGAGGGGGGCAGCGGCCAT
GCCAGCGCCCACTACATGTACCGGCAGGAGGGCTACGAGACGGTGTCCTACGGGGACAACTTGTATGTGT
GCATTCCCTGCGCCAAGGGCTTCCCCAGCTCTGAGCAGCTCAATGCGCACGTGGAGACTCACACGGAGGA
AGAGCTGTTCATCAAGGAAGAGGGGGCCTACGAGACAGGCAGTGGGGGTGCCGAGGAGGAGGCCGAGGAC
CTGTCAGCACCCAGTGCGGCCTACACGGCTGAGCCCCGGCCCTTCAAGTGTTCGGTCTGCGAGAAGACCT
ACAAGGACCCAGCCACGCTGCGGCAGCACGAGAAGACGCACTGGCTGACACGGCCCTTCCCCTGCAACAT
CTGTGGCAAAATGTTCACGCAGCGCGGCACCATGACGCGTCACATGCGGAGCCACCTGGGCCTGAAGCCC
TTCGCCTGCGATGAGTGTGGCATGCGCTTCACCCGTCAGTACCGCCTCACGGAGCACATGCGTGTGCACT
CGGGCGAGAAACCTTACGAGTGCCAGCTGTGCGGGGGCAAGTTCACCCAGCAGCGCAACCTCATCAGCCA
CCTGCGCATGCACACCTCCCCCTCCTAG

Translation (615 aa):
MVSGPLALRWCAWAGRGDMGPDMELPSHSKQLLLQLNQQRTKGFLCDVIIMVENSIFRAHKNVLAASSIY
FKSLVLHDNLINLDTDMVSSTVFQQILDFIYTGKLLPSDQPAEPNFSTLLTAASYLQLPELAALCRRKLK
RAGKPFGSGRAGSTGMGRPPRSQRLSTASVIQARYQGLVDGRKGAHAPQELPQAKGSDDELFLGGSNQDS
VQGLGRAVCPAGGEAGLGGCSSSTNGSSGGCEQELGLDLSKKSPPLPPATPGPHLTPDDAAQLSDSQHGS
PPAASAPPVANSASYSELGGTPDEPMDLEGAEDNHLSLLEAPGGQPRKSLRHSTRKKEWGKKEPVAGSPF
ERREAGPKGPCPGEEGEGVGDRVPNGILASGAGPSGPYGEPPYPCKEEEENGKDASEDSAQSGSEGGSGH
ASAHYMYRQEGYETVSYGDNLYVCIPCAKGFPSSEQLNAHVETHTEEELFIKEEGAYETGSGGAEEEAED
LSAPSAAYTAEPRPFKCSVCEKTYKDPATLRQHEKTHWLTRPFPCNICGKMFTQRGTMTRHMRSHLGLKP
FACDECGMRFTRQYRLTEHMRVHSGEKPYECQLCGGKFTQQRNLISHLRMHTSPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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