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Report for CCDS1003.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1003.1 Public Homo sapiens 1 MRPL9 24 110 108 CCDS HistoryNCBI Gene:65005Re-query CCDS DB by CCDS ID:1003.1Re-query CCDS DB by GeneID:65005See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1003.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368830.8 ENSP00000357823.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368830.8Link to Ensembl Protein Viewer:ENSP00000357823.3Re-query CCDS DB by Nucleotide ID:ENST00000368830Re-query CCDS DB by Protein ID:ENSP00000357823
Original member Current member NCBI NM_031420.4 NP_113608.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031420.4Link to Protein Sequence:NP_113608.1Re-query CCDS DB by Nucleotide ID:NM_031420Re-query CCDS DB by Protein ID:NP_113608Link to BLAST:NP_113608.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_113608.1 267 Q9BYD2 267 100% 0 0

Chromosomal Locations for CCDS 1003.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151760050 151760181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151760816 151760899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151761451 151761552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151762105 151762155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151762376 151762500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151762990 151763146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151763327 151763479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (804 nt):
ATGGCGGCGCCCGTTGTCACGGCCCCGGGCAGAGCTCTGCTGCGGGCGGGCGCTGGACGGCTGCTTCGGG
GAGGCGTCCAGGAGCTACTGCGGCCGCGACATGAAGGGAACGCCCCTGACCTGGCCTGCAACTTCAGCCT
TTCTCAAAATCGGGGCACGGTCATCGTGGAGCGCTGGTGGAAGGTACCGCTGGCCGGGGAGGGCCGGAAG
CCGCGCCTGCACCGGCGACATCGCGTCTATAAGCTGGTGGAGGACACGAAGCATCGGCCCAAAGAAAACC
TGGAGCTCATCCTGACGCAGTCGGTGGAGAATGTTGGAGTCCGGGGTGACCTGGTCTCAGTGAAGAAATC
TTTAGGCCGGAATCGACTCCTTCCTCAGGGACTGGCTGTATATGCATCCCCTGAAAACAAGAAGCTGTTT
GAAGAGGAGAAATTGCTGAGACAAGAAGGAAAATTAGAGAAGATCCAGACCAAGGCAGGTGAGGCGACAG
TGAAATTTCTAAAAAGCTGTCGCCTGGAGGTAGGGATGAAGAACAATGTCAAATGGGAGCTGAACCCTGA
AATAGTTGCCCGCCACTTCTTTAAGAATCTTGGTGTTGTGGTTGCCCCACATACATTAAAGTTACCAGAA
GAGCCTATCACACGGTGGGGCGAGTATTGGTGTGAGGTGACGGTAAATGGGCTTGATACTGTGAGAGTGC
CTATGTCTGTCGTGAACTTTGAGAAGCCCAAGACCAAAAGATATAAGTACTGGTTAGCCCAGCAAGCTGC
CAAGGCTATGGCCCCCACCAGCCCCCAGATCTAA

Translation (267 aa):
MAAPVVTAPGRALLRAGAGRLLRGGVQELLRPRHEGNAPDLACNFSLSQNRGTVIVERWWKVPLAGEGRK
PRLHRRHRVYKLVEDTKHRPKENLELILTQSVENVGVRGDLVSVKKSLGRNRLLPQGLAVYASPENKKLF
EEEKLLRQEGKLEKIQTKAGEATVKFLKSCRLEVGMKNNVKWELNPEIVARHFFKNLGVVVAPHTLKLPE
EPITRWGEYWCEVTVNGLDTVRVPMSVVNFEKPKTKRYKYWLAQQAAKAMAPTSPQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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