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Report for CCDS23879.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23879.1 Public Mus musculus 10 Eif4ebp2 23 108 98 CCDS HistoryNCBI Gene:13688Re-query CCDS DB by CCDS ID:23879.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23879.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020288.14 ENSMUSP00000020288.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020288.14Link to Ensembl Protein Viewer:ENSMUSP00000020288.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000020288Re-query CCDS DB by Protein ID:ENSMUSP00000020288
Original member Current member EBI ENSMUST00000167087.1 ENSMUSP00000131952.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000167087.1Link to Ensembl Protein Viewer:ENSMUSP00000131952.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000167087Re-query CCDS DB by Protein ID:ENSMUSP00000131952
Original member Current member NCBI NM_010124.2 NP_034254.1 Accepted alive Link to Nucleotide Sequence:NM_010124.2Link to Protein Sequence:NP_034254.1Re-query CCDS DB by Nucleotide ID:NM_010124Re-query CCDS DB by Protein ID:NP_034254Link to BLAST:NP_034254.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034254.1 120 P70445 120 100% 0 0

Chromosomal Locations for CCDS 23879.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 61433797 61433828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61434918 61435103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61452402 61452546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (363 nt):
ATGTCCGCGTCGGCCGGTGGTAGCCACCAGCCCAGCCAGAGCCGCGCCATCCCCACGCGCACCGTGGCTA
TCAGCGACGCCGCGCAGCTACCTCAGGACTACTGCACCACGCCCGGGGGGACGCTGTTCTCCACAACGCC
GGGAGGAACACGAATCATTTATGACCGAAAGTTTCTGTTGGACCGTCGCAATTCTCCCATGGCGCAGACC
CCACCTTGCCATCTGCCCAATATCCCTGGAGTCACCAGTCCTGGCGCCTTAATTGAAGACTCCAAAGTAG
AAGTGAACAACTTAAACAACCTGAACAATCATGACAGGAAGCATGCAGTTGGGGATGAGGCTCAGTTTGA
GATGGACATCTGA

Translation (120 aa):
MSASAGGSHQPSQSRAIPTRTVAISDAAQLPQDYCTTPGGTLFSTTPGGTRIIYDRKFLLDRRNSPMAQT
PPCHLPNIPGVTSPGALIEDSKVEVNNLNNLNNHDRKHAVGDEAQFEMDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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