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Report for CCDS15018.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15018.1 Public Mus musculus 1 Crygf 23 108 98 CCDS HistoryNCBI Gene:12969Re-query CCDS DB by CCDS ID:15018.1Re-query CCDS DB by GeneID:12969See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15018.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027082.10 ENSMUSP00000027082.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027082.10Link to Ensembl Protein Viewer:ENSMUSP00000027082.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000027082Re-query CCDS DB by Protein ID:ENSMUSP00000027082
Original member Current member NCBI NM_027010.3 NP_081286.1 Accepted alive Link to Nucleotide Sequence:NM_027010.3Link to Protein Sequence:NP_081286.1Re-query CCDS DB by Nucleotide ID:NM_027010Re-query CCDS DB by Protein ID:NP_081286Link to BLAST:NP_081286.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081286.1 174 Q9CXV3 174 100% 0 0

Chromosomal Locations for CCDS 15018.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 65926558 65926566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65926648 65926890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65927971 65928243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGGGGAAGATCACCTTCTATGAGGACCGCAGCTTCCAGGGCCGCCACTATGAGTGCAGCACCGACCACT
CCAACCTGCAGCCCTACTTCAGCCGCTGCAACTCTGTGCGAGTGGACAGTGGCTGCTGGATGCTCTATGA
GCAGCCCAACTTCGCAGGCTGCCAGTACTTCCTGCGTCGCGGGGACTACCCTGACTACCAGCAGTGGATG
GGTTTCAGTGACTCTGTCCGCTCCTGCCACCTCATCCCCCACTCCACTTCTCACAGGATCAGGATCTACG
AGCGAGAGGACTACAGAGGCCAGATGGTGGAGATCACAGACGACTGCTCCCACCTGCAGGACCGCTTCCA
CTTCAGTGACTTCCACTCCTTCCACGTGATGGAGGGCTACTGGGTCCTCTACGAGATGCCCAACTACCGG
GGGCGGCAGTACCTGCTGAGGCCAGGGGAGTATAGGCGCTACCACGATTGGGGCGCCATGAATGCCAGGG
TGGGCTCTCTGAGGAGAATCATGGATTTCTATTGA

Translation (174 aa):
MGKITFYEDRSFQGRHYECSTDHSNLQPYFSRCNSVRVDSGCWMLYEQPNFAGCQYFLRRGDYPDYQQWM
GFSDSVRSCHLIPHSTSHRIRIYEREDYRGQMVEITDDCSHLQDRFHFSDFHSFHVMEGYWVLYEMPNYR
GRQYLLRPGEYRRYHDWGAMNARVGSLRRIMDFY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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