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Report for CCDS29419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29419.1 Public Mus musculus 19 Rps6kb2 23 108 98 CCDS HistoryNCBI Gene:58988Re-query CCDS DB by CCDS ID:29419.1Re-query CCDS DB by GeneID:58988See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29419.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025749.14 ENSMUSP00000025749.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025749.14Link to Ensembl Protein Viewer:ENSMUSP00000025749.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000025749Re-query CCDS DB by Protein ID:ENSMUSP00000025749
Original member Current member NCBI NM_021485.3 NP_067460.1 Accepted alive Link to Nucleotide Sequence:NM_021485.3Link to Protein Sequence:NP_067460.1Re-query CCDS DB by Nucleotide ID:NM_021485Re-query CCDS DB by Protein ID:NP_067460Link to BLAST:NP_067460.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067460.1 485 Q9Z1M4 485 100% 0 0

Chromosomal Locations for CCDS 29419.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 4157010 4157199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4157482 4157594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4157682 4157789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4157879 4157956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4158066 4158128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4158610 4158717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4158829 4158919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4159003 4159093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4159227 4159327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4159403 4159460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4161068 4161215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4162260 4162328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4162603 4162723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4162822 4162862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4163168 4163245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1458 nt):
ATGGCGGCCGTATTTGATTTAGACTTGGAGACCGAGGAAGGGAGCGAGGGCGAGGGCGAACCGGAGTTCA
GCCCTGCGGACGTGTGTCCCCTTGGCGAATTAAGGGCTGCTGGCCTGGAGACAGTGGGACACTATGAAGA
AGTAGAGCTGACAGAGAGCAGCGTGAACCTGGGTCCTGAGCGCATCGGGCCCCACTGCTTTGAGCTACTG
AGTGTACTGGGCAAGGGGGGCTATGGCAAGGTGTTCCAGGTGAGAAAAGTGCAAGGCACCAACTTGGGAA
AAATATATGCCATGAAGGTCTTAAGGAAGGCCAAGATTGTATGCAGTGCCAAGGACACAGCCCATACCCG
GGCTGAGAGGAACATTCTAGAATCTGTGAAGCATCCCTTCATTGTAGAACTGGCCTATGCTTTCCAGACA
GGTGGCAAACTCTACCTCATCCTGGAGTGCCTCAGTGGTGGTGAGCTCTTCACACATCTTGAGCGAGAAG
GCATCTTCCTGGAAGACACAGCCTGCTTCTACCTGGCAGAGATCACACTAGCCCTGGGCCATCTCCATTC
CCACGGCATCATCTACCGGGACCTCAAGCCTGAGAACATCATGCTCAGCAGCCAGGGCCACATCAAACTG
ACAGACTTTGGACTTTGCAAGGAGTCCATTCATGAGGGTGCTATCACTCACACCTTCTGTGGCACCATTG
AGTACATGGCCCCAGAGATTCTAGTGCGCACTGGTCACAACCGGGCAGTGGACTGGTGGAGCCTGGGAGC
CCTGATGTACGACATGCTCACTGGATCGCCGCCCTTCACTGCAGAGAACCGGAAGAAAACTATGGATAAA
ATCATTAAAGGGAAGCTGGTGCTGCCCCCCTACCTCACCCCGGATGCCCGGGACCTTGCCAAAAAGTTTC
TGAAGCGGAACCCCACTCAGCGAATTGGGGGTGGCCTGGGAGATGCTGCTGATGTCCAGAGGCACCCCTT
TTTCCGGCACATCAATTGGGATGATCTCTTGGCCCGCCGCGTGGACCCTCCCTTCAGGCCAAGTCTGCAA
TCAGAAGAGGATGTGAGCCAGTTTGATGCACGATTCACACGGCAGACGCCGGTAGATAGTCCAGATGACA
CAGCCCTCAGTGAGAGTGCCAACCAAGCCTTCCTGGGCTTTACATATGTGGCACCTTCTGTCCTGGACAG
CATCAAAGAGGGCTTCTCCTTCCAGCCCAAGCTGCGTTCTCCCAGACGCCTTAACAGCAGTCCCCGCACC
CCCATCAGCCCCCTCAAGTTCTCTCCCTTTGAGGGGTTCCGGCCCAGTCCCGGCCCACCAGAGCCCATGG
AGCCATCTCTACCTCCACTCCTACCATCACCACCATCACCACCACCCACAAGCACTGCCCCCCTTCCCAT
CCGTCCTCCCTCAGGAACCAAGAAGTCCAAGAAGGGACGGGGCCGCTCAGGGCGTTAG

Translation (485 aa):
MAAVFDLDLETEEGSEGEGEPEFSPADVCPLGELRAAGLETVGHYEEVELTESSVNLGPERIGPHCFELL
SVLGKGGYGKVFQVRKVQGTNLGKIYAMKVLRKAKIVCSAKDTAHTRAERNILESVKHPFIVELAYAFQT
GGKLYLILECLSGGELFTHLEREGIFLEDTACFYLAEITLALGHLHSHGIIYRDLKPENIMLSSQGHIKL
TDFGLCKESIHEGAITHTFCGTIEYMAPEILVRTGHNRAVDWWSLGALMYDMLTGSPPFTAENRKKTMDK
IIKGKLVLPPYLTPDARDLAKKFLKRNPTQRIGGGLGDAADVQRHPFFRHINWDDLLARRVDPPFRPSLQ
SEEDVSQFDARFTRQTPVDSPDDTALSESANQAFLGFTYVAPSVLDSIKEGFSFQPKLRSPRRLNSSPRT
PISPLKFSPFEGFRPSPGPPEPMEPSLPPLLPSPPSPPPTSTAPLPIRPPSGTKKSKKGRGRSGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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