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Report for CCDS7715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7715.1 Public Homo sapiens 11 SLC25A22 24 110 108 CCDS HistoryNCBI Gene:79751Re-query CCDS DB by CCDS ID:7715.1Re-query CCDS DB by GeneID:79751See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7715.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320230.9 ENSP00000322020.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000320230.9Link to Ensembl Protein Viewer:ENSP00000322020.5Re-query CCDS DB by Nucleotide ID:ENST00000320230Re-query CCDS DB by Protein ID:ENSP00000322020
Original member Current member EBI ENST00000531214.5 ENSP00000437236.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000531214.5Link to Ensembl Protein Viewer:ENSP00000437236.1Re-query CCDS DB by Nucleotide ID:ENST00000531214Re-query CCDS DB by Protein ID:ENSP00000437236
Original member Current member EBI ENST00000628067.3 ENSP00000486058.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000628067.3Link to Ensembl Protein Viewer:ENSP00000486058.1Re-query CCDS DB by Nucleotide ID:ENST00000628067Re-query CCDS DB by Protein ID:ENSP00000486058
Original member Current member NCBI NM_001191060.2 NP_001177989.1 Accepted alive Link to Nucleotide Sequence:NM_001191060.2Link to Protein Sequence:NP_001177989.1Re-query CCDS DB by Nucleotide ID:NM_001191060Re-query CCDS DB by Protein ID:NP_001177989Link to BLAST:NP_001177989.1
Original member Current member NCBI NM_001191061.2 NP_001177990.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001191061.2Link to Protein Sequence:NP_001177990.1Re-query CCDS DB by Nucleotide ID:NM_001191061Re-query CCDS DB by Protein ID:NP_001177990Link to BLAST:NP_001177990.1
Original member Current member NCBI NM_024698.6 NP_078974.1 Accepted alive Link to Nucleotide Sequence:NM_024698.6Link to Protein Sequence:NP_078974.1Re-query CCDS DB by Nucleotide ID:NM_024698Re-query CCDS DB by Protein ID:NP_078974Link to BLAST:NP_078974.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177989.1 323 Q9H936 323 100% 0 0
NP_001177990.1 323 Q9H936 323 100% 0 0
NP_078974.1 323 Q9H936 323 100% 0 0

Chromosomal Locations for CCDS 7715.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 791915 792068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 792142 792217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 792304 792458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 792553 792727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 792870 792988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 793529 793619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 794458 794513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 794776 794901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 794987 795006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGGCTGATAAGCAGATCAGCCTGCCAGCCAAGCTCATCAATGGCGGCATCGCCGGGCTGATCGGTGTCA
CCTGCGTGTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGTGTACAC
GAGCATGTCCGACTGCCTCATCAAGACCGTCCGCTCCGAGGGCTACTTCGGCATGTACCGGGGAGCTGCT
GTGAACTTGACCCTCGTCACCCCCGAGAAGGCCATCAAGCTGGCAGCCAACGACTTCTTCCGACATCAGC
TCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGCACCTGCCA
GGTGATCGTGACCACGCCCATGGAGATGCTGAAGATCCAGCTGCAGGATGCAGGGCGCATTGCCGCCCAG
AGGAAGATCCTGGCTGCCCAGGGCCAGCTCTCGGCCCAGGGGGGTGCCCAGCCCTCAGTGGAGGCTCCAG
CTGCCCCTCGGCCCACGGCCACCCAGCTGACCCGCGACCTGCTGCGGAGCCGTGGCATTGCCGGTCTCTA
CAAGGGACTCGGGGCCACGCTGCTCAGGGATGTCCCCTTCTCTGTGGTGTACTTCCCGCTCTTTGCCAAC
CTGAACCAGCTGGGCCGCCCGGCGTCCGAGGAGAAGTCGCCTTTCTACGTGTCCTTCCTGGCCGGCTGTG
TGGCTGGGAGTGCCGCCGCTGTGGCCGTCAACCCCTGTGATGTGGTGAAGACGCGGCTCCAGTCACTTCA
GCGAGGCGTCAACGAGGACACCTACTCTGGGATCCTGGACTGTGCCAGGAAGATCCTGCGGCACGAGGGC
CCCTCGGCCTTCCTGAAGGGCGCCTACTGCCGCGCGCTGGTCATCGCGCCCCTTTTCGGCATCGCACAGG
TGGTCTACTTCCTGGGCATCGCGGAGTCCCTGCTGGGGCTGCTGCAGGACCCCCAGGCCTGA

Translation (323 aa):
MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSEGYFGMYRGAA
VNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIVTTPMEMLKIQLQDAGRIAAQ
RKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRSRGIAGLYKGLGATLLRDVPFSVVYFPLFAN
LNQLGRPASEEKSPFYVSFLAGCVAGSAAAVAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEG
PSAFLKGAYCRALVIAPLFGIAQVVYFLGIAESLLGLLQDPQA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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