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Report for CCDS27810.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27810.1 Public Mus musculus 15 Dhh 23 108 98 CCDS HistoryNCBI Gene:13363Re-query CCDS DB by CCDS ID:27810.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27810.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023737.5 ENSMUSP00000023737.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023737.5Link to Ensembl Protein Viewer:ENSMUSP00000023737.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000023737Re-query CCDS DB by Protein ID:ENSMUSP00000023737
Original member Current member NCBI NM_007857.5 NP_031883.1 Accepted alive Link to Nucleotide Sequence:NM_007857.5Link to Protein Sequence:NP_031883.1Re-query CCDS DB by Nucleotide ID:NM_007857Re-query CCDS DB by Protein ID:NP_031883Link to BLAST:NP_031883.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031883.1 396 Q61488 396 100% 0 0

Chromosomal Locations for CCDS 27810.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 98893935 98894560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98894813 98895074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98897970 98898272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1191 nt):
ATGGCTCTGCCGGCCAGTCTGTTGCCCCTGTGCTGCTTGGCACTCTTGGCACTATCTGCCCAGAGCTGCG
GGCCGGGCCGAGGACCGGTTGGCCGGCGGCGTTATGTGCGCAAGCAACTTGTGCCTCTGCTATACAAGCA
GTTTGTGCCCAGTATGCCCGAGCGGACCCTGGGCGCGAGTGGGCCAGCGGAGGGGAGGGTAACAAGGGGG
TCGGAGCGCTTCCGGGACCTCGTACCCAACTACAACCCCGACATAATCTTCAAGGATGAGGAGAACAGCG
GCGCAGACCGCCTGATGACAGAGCGTTGCAAAGAGCGGGTGAACGCTCTAGCCATCGCGGTGATGAACAT
GTGGCCCGGAGTACGCCTACGTGTGACTGAAGGCTGGGACGAGGACGGCCACCACGCACAGGATTCACTC
CACTACGAAGGCCGTGCCTTGGACATCACCACGTCTGACCGTGACCGTAATAAGTATGGTTTGTTGGCGC
GCCTAGCTGTGGAAGCCGGATTCGACTGGGTCTACTACGAGTCCCGCAACCACATCCACGTATCGGTCAA
AGCTGATAACTCACTGGCGGTCCGAGCCGGAGGCTGCTTTCCGGGAAATGCCACGGTGCGCTTGCGGAGC
GGCGAACGGAAGGGGCTGAGGGAACTACATCGTGGTGACTGGGTACTGGCCGCTGATGCAGCGGGCCGAG
TGGTACCCACGCCAGTGCTGCTCTTCCTGGACCGGGATCTGCAGCGCCGCGCCTCGTTCGTGGCTGTGGA
GACCGAGCGGCCTCCGCGCAAACTGTTGCTCACACCCTGGCATCTGGTGTTCGCTGCTCGCGGGCCAGCG
CCTGCTCCAGGTGACTTTGCACCGGTGTTCGCGCGCCGCTTACGTGCTGGCGACTCGGTGCTGGCTCCCG
GCGGGGACGCGCTCCAGCCGGCGCGCGTAGCCCGCGTGGCGCGCGAGGAAGCCGTGGGCGTGTTCGCACC
GCTCACTGCGCACGGGACGCTGCTGGTCAACGACGTCCTCGCCTCCTGCTACGCGGTTCTAGAGAGTCAC
CAGTGGGCCCACCGCGCCTTCGCCCCTTTGCGGCTGCTGCACGCGCTCGGGGCTCTGCTCCCTGGGGGTG
CAGTCCAGCCGACTGGCATGCATTGGTACTCTCGCCTCCTTTACCGCTTGGCCGAGGAGTTAATGGGCTG
A

Translation (396 aa):
MALPASLLPLCCLALLALSAQSCGPGRGPVGRRRYVRKQLVPLLYKQFVPSMPERTLGASGPAEGRVTRG
SERFRDLVPNYNPDIIFKDEENSGADRLMTERCKERVNALAIAVMNMWPGVRLRVTEGWDEDGHHAQDSL
HYEGRALDITTSDRDRNKYGLLARLAVEAGFDWVYYESRNHIHVSVKADNSLAVRAGGCFPGNATVRLRS
GERKGLRELHRGDWVLAADAAGRVVPTPVLLFLDRDLQRRASFVAVETERPPRKLLLTPWHLVFAARGPA
PAPGDFAPVFARRLRAGDSVLAPGGDALQPARVARVAREEAVGVFAPLTAHGTLLVNDVLASCYAVLESH
QWAHRAFAPLRLLHALGALLPGGAVQPTGMHWYSRLLYRLAEELMG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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