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Report for CCDS18450.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18450.1 Public Mus musculus 4 Gpx7 23 108 98 CCDS HistoryNCBI Gene:67305Re-query CCDS DB by CCDS ID:18450.1Re-query CCDS DB by GeneID:67305See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 18450.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030332.6 ENSMUSP00000030332.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030332.6Link to Ensembl Protein Viewer:ENSMUSP00000030332.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000030332Re-query CCDS DB by Protein ID:ENSMUSP00000030332
Original member Current member NCBI NM_024198.3 NP_077160.1 Accepted alive Link to Nucleotide Sequence:NM_024198.3Link to Protein Sequence:NP_077160.1Re-query CCDS DB by Nucleotide ID:NM_024198Re-query CCDS DB by Protein ID:NP_077160Link to BLAST:NP_077160.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077160.1 186 Q99LJ6 186 100% 0 0

Chromosomal Locations for CCDS 18450.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 108400834 108400997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 108403201 108403462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 108406543 108406677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (561 nt):
ATGGTTGCAGCTGTGGCGACGGCGTGGCTGCTCCTGTGGGCCGCGGCCTGCGCGCAATCCGAGCAGGACT
TCTACGACTTCAAGGCGGTCAACATCCGGGGCAAGCTGGTGTCGCTGGAGAAGTACCGTGGCTCGGTTTC
CCTGGTGGTGAACGTAGCTAGCGAATGTGGCTTCACAGACCAGAACTACCGAGCCTTGCAGCAGCTGCAG
CGGGACCTGGGCCCCCATCATTTTAATGTGCTTGCCTTCCCTTGCAACCAGTTTGGCCAACAGGAACCAG
ACACCAACAGGGAGATTGAGAACTTTGCCCGCCGCACCTACAGTGTCTCTTTTCCCATGTTTAGCAAGAT
CGCAGTCACTGGCACTGGTGCCCACCCTGCCTTCAAGTACCTAACCCAGACTTCTGGGAAGGAGCCCACC
TGGAACTTCTGGAAGTACCTAGTGGACCCAGACGGAAAGGTGGTGGGAGCATGGGACCCCACTGTGCCAG
TGGCGGAGATCAAGCCCCGTATTACAGAGCAGGTGATGAAACTCATCCTTCGGAAACGAGAAGACTTGTG
A

Translation (186 aa):
MVAAVATAWLLLWAAACAQSEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQNYRALQQLQ
RDLGPHHFNVLAFPCNQFGQQEPDTNREIENFARRTYSVSFPMFSKIAVTGTGAHPAFKYLTQTSGKEPT
WNFWKYLVDPDGKVVGAWDPTVPVAEIKPRITEQVMKLILRKREDL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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