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Report for CCDS793.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
793.1 Public Homo sapiens 1 CLCC1 24 110 108 CCDS HistoryNCBI Gene:23155Re-query CCDS DB by CCDS ID:793.1Re-query CCDS DB by GeneID:23155See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 793.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369970.8 ENSP00000358987.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369970.8Link to Ensembl Protein Viewer:ENSP00000358987.3Re-query CCDS DB by Nucleotide ID:ENST00000369970Re-query CCDS DB by Protein ID:ENSP00000358987
Original member Current member EBI ENST00000686434.1 ENSP00000508570.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000686434.1Link to Ensembl Protein Viewer:ENSP00000508570.1Re-query CCDS DB by Nucleotide ID:ENST00000686434Re-query CCDS DB by Protein ID:ENSP00000508570
Original member Current member EBI ENST00000685628.1 ENSP00000509075.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000685628.1Link to Ensembl Protein Viewer:ENSP00000509075.1Re-query CCDS DB by Nucleotide ID:ENST00000685628Re-query CCDS DB by Protein ID:ENSP00000509075
Original member Current member EBI ENST00000687226.1 ENSP00000509162.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000687226.1Link to Ensembl Protein Viewer:ENSP00000509162.1Re-query CCDS DB by Nucleotide ID:ENST00000687226Re-query CCDS DB by Protein ID:ENSP00000509162
Original member Current member EBI ENST00000687734.1 ENSP00000510543.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000687734.1Link to Ensembl Protein Viewer:ENSP00000510543.1Re-query CCDS DB by Nucleotide ID:ENST00000687734Re-query CCDS DB by Protein ID:ENSP00000510543
Original member Current member NCBI NM_015127.5 NP_055942.1 Accepted alive Link to Nucleotide Sequence:NM_015127.5Link to Protein Sequence:NP_055942.1Re-query CCDS DB by Nucleotide ID:NM_015127Re-query CCDS DB by Protein ID:NP_055942Link to BLAST:NP_055942.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055942.1 501 Q96S66-2 501 100% 0 0

Chromosomal Locations for CCDS 793.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 108934670 108934942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108937077 108937418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108939636 108939782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108940045 108940142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108941405 108941498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108943475 108943615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108943836 108943907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108947611 108947718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108949820 108949921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108950309 108950437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1506 nt):
ATGCTGTGTTCTTTGCTCCTTTGTGAATGTCTGTTGCTGGTAGCTGGTTATGCTCATGATGATGACTGGA
TT
GACCCCACAGACATGCTTAACTATGATGCTGCTTCAGGAACAATGAGAAAATCTCAGGCAAAATATGG
T
ATTTCAGGGGAAAAGGATGTCAGTCCTGACTTGTCATGTGCTGATGAAATATCAGAATGTTATCACAAA
CTT
GATTCTTTAACTTATAAGATTGATGAGTGTGAAAAGAAAAAGAGGGAAGACTATGAAAGTCAAAGCA
AT
CCTGTTTTTAGGAGATACTTAAATAAGATTTTAATTGAAGCTGGAAAGCTTGGACTTTTTCATGATTT
T
GAAACATGGAAGTGGCGATTCGAAGATTCCTTTGGAGTGGATCCATATAATGTGTTAATGGTACTTCTT
TGT
CTGCTCTGCATCGTGGTTTTAGTGGCTACTGAGCTGTGGACATATGTACGTTGGTACACTCAGTTGA
GA
CGTGTTTTAATCATCAGCTTTCTGTTCAGTTTGGGATGGAATTGGATGTATTTATATAAGCTAGCTTT
T
GCACAGCATCAGGCTGAAGTCGCCAAGATGGAGCCATTAAACAATGTGTGTGCCAAAAAGATGGACTGG
ACT
GGAAGTATCTGGGAATGGTTTAGAAGTTCATGGACCTATAAGGATGACCCATGCCAAAAATACTATG
AG
CTCTTACTAGTCAACCCTATTTGGTTGGTCCCACCAACAAAGGCACTTGCAGTTACATTCACCACATT
T
GTAACGGAGCCATTGAAGCATATTGGAAAAGGAACTGGGGAATTTATTAAAGCACTCATGAAGGAAATT
CCA
GCGCTGCTTCATCTTCCAGTGCTGATAATTATGGCATTAGCCATCCTGAGTTTCTGCTATGGTGCTG
GA
AAATCAGTTCATGTGCTGAGACATATAGGCGGTCCTGAGAGCGAACCTCCCCAGGCACTTCGGCCACG
G
GATAGAAGACGGCAGGAGGAAATTGATTATAGACCTGATGGTGGAGCAGGTGATGCCGATTTCCATTAT
AGG
GGCCAAATGGGCCCCACTGAGCAAGGCCCTTATGCCAAAACGTATGAGGGTAGAAGAGAGATTTTGA
GA
GAGAGAGATGTTGACTTGAGATTTCAGACTGGCAACAAGAGCCCTGAAGTGCTCCGGGCATTTGATGT
A
CCAGACGCAGAGGCACGAGAGCATCCCACGGTGGTACCCAGTCATAAATCACCTGTTTTGGATACAAAG
CCC
AAGGAGACAGGTGGAATCCTGGGGGAAGGCACACCGAAAGAAAGCAGTACTGAAAGCAGCCAGTCGG
CC
AAGCCTGTCTCTGGCCAAGACACATCAGGGAATACAGAAGGTTCACCCGCAGCGGAAAAGGCCCAGCT
C
AAGTCTGAAGCCGCAGGCAGCCCAGACCAAGGCAGCACATACAGCCCCGCAAGAGGTGTGGCTGGACCA
CGT
GGACAGGATCCGGTCAGCAGCCCCTGTGGCTAG


Translation (501 aa):
MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSCADEISECYHK
L
DSLTYK
IDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLFHDFETWKWRFEDSFGVDPYNVLMVLL
C
LLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYK
LAFAQHQAEVAKMEPLNNVCAKKMDW
T
GSIW
EWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKALAVTFTTFVTEPLKHIGKGTGEFIKALMKEI
P
ALLHLPVLIIMALAIL
SFCYGAGKSVHVLRHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHY
R
GQMGPTEQGPYAKTYEGRREILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPS
HKSPVLDTK
P
KETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
R
GQDPVSSPCG




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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