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Report for CCDS42976.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42976.1 Public Homo sapiens 22 GAB4 24 110 108 CCDS HistoryNCBI Gene:128954Re-query CCDS DB by CCDS ID:42976.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42976.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400588.5 ENSP00000383431.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000400588.5Link to Ensembl Protein Viewer:ENSP00000383431.1Re-query CCDS DB by Nucleotide ID:ENST00000400588Re-query CCDS DB by Protein ID:ENSP00000383431
Original member Current member NCBI NM_001037814.1 NP_001032903.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001037814.1Link to Protein Sequence:NP_001032903.1Re-query CCDS DB by Nucleotide ID:NM_001037814Re-query CCDS DB by Protein ID:NP_001032903Link to BLAST:NP_001032903.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001032903.1 574 Q2WGN9 574 100% 0 0

Chromosomal Locations for CCDS 42976.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 16962733 16962876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 16963725 16963829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 16964766 16964862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 16965178 16965268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 16966100 16966364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 16968298 16968383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 16969943 16970193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 16987960 16988167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 16991873 16992176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 17007941 17008114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1725 nt):
ATGTCCCTGCCGTCCCCCTCACCCTCCCGGGAGCTGTGCCCACCTGACCCGGCATTTGCGCCTTTGTCTT
CGTGGCCCGGAAGTGGCCCCGCCGGCGGAAGCACGAGAAGTGGCCACGTGCTGTACAGCGGCTGGCTGAG
GAAGTCGCCCCCCGAGAAGAAGCTGAGGCTCTTTGCCTGGAGGAAACGCTGGTTTATCCTGCGGAGGGGC
CAGACTAGCAGTGACCCAGATGTTCTGGAATACTACAAGAATGATGGCTCCAAGAAGCCCCTGCGCACCA
TCAACCTGAACCTCTGTGAGCAGCTGGATGTTGATGTGACTCTGAACTTCAACAAGAAGGAGATTCAGAA
GGGCTATATGTTTGACATCAAGACCAGTGAGCGTACCTTTTACCTGGTGGCTGAGACCAGGGAGGACATG
AATGAGTGGGTCCAGAGCATCTGTCAGATCTGTGGCTTCAGGCAGGAGGAAAGCACAGGCTTCCTGGGAA
ACATTTCCTCAGCCAGTCACGGCCTCTGCTCTTCTCCAGCTGAGCCCAGCTGCTCCCATCAGCACCTCCC
CCAAGAACAAGAACCCACATCTGAGCCCCCGGTGTCTCACTGTGTGCCGCCCACCTGGCCCATCCCTGCA
CCTCCGGGGTGTCTCCGCTCGCACCAGCACGCCAGCCAGAGAGCAGAACATGCAAGGAGTGCCAGCTTCT
CCCAGGGTTCTGAGGCCCCATTCATCATGAGGAGAAACACAGCCATGCAAAATCTTGCCCAGCACAGTGG
ATACAGTGTTGATGGGGTCAGCGGTCACATCCATGGCTTCCATAGCCTTTCCAAGCCCAGCCAGCACAAT
GCAGAATTCAGAGGCAGCACCCACAGAATCCCCTGGAGCCTGGCCTCCCATGGCCACACCAGAGGCAGCC
TCACAGGCTCTGAGGCGGATAATGAGGCTTCCTCCGGCAAGTACACCCAGCATGGTGGAGGGAATGCCAG
CCGGCCTGCTGAGTCCATGCATGAGGGAGTCTGTTCTTTCCTGCCAGGAAGAACGCTTGTGGGCCTGTCA
GACAGCATTGCTTCTGAGGGCAGCTGTGTGCCCATGAACCCAGGCTCCCCTACCCTGCCGGCTGTGAAGC
AAGCAGGCGATGATTCCCAGGGTGTCTGCATCCCTGTGGGCTCATGTCTTGTTCGCTTTGACCTGCTTGG
CTCCCCACTCACAGAGCTTTCTATGCACCAAGACCTCAGCCAGGGACATGAGGTCCAGCTGCCCCCTGTC
AACCGCAGCCTCAAGCCTAACCAGAAGGCCAACCCAACACCGCCCAACCTGAGAAACAACAGGGTCATCA
ATGAGCTCTCCTTCAAGCCACCTGTCACAGAGCCCTGGTCTGGGACCAGCCACACCTTTGACTCCAGCTC
CTCCCAACACCCCATCTCCACGCAGAGCATCACCAACACAGACTCAGAAGACAGTGGAGAGAGGTATCTT
TTCCCGAACCCGGCATCTGCATTTCCTGTTTCCGGTGGCACCAGCAGTTCAGCCCCGCCGAGGAGCACTG
GTAACATCCACTACGCGGCCCTGGACTTCCAGCCGAGCAAGCCATCCATAGGCTCTGTCACGTCCGGCAA
GAAGGTGGACTATGTCCAGGTGGATCTGGAGAAGACCCAGGCCCTGCAGAAGACCATGCATGAACAGATG
TGCCTGCGGCAGTCCTCAGAGCCTCCCAGGGGCGCCAAGCTGTGA

Translation (574 aa):
MSLPSPSPSRELCPPDPAFAPLSSWPGSGPAGGSTRSGHVLYSGWLRKSPPEKKLRLFAWRKRWFILRRG
QTSSDPDVLEYYKNDGSKKPLRTINLNLCEQLDVDVTLNFNKKEIQKGYMFDIKTSERTFYLVAETREDM
NEWVQSICQICGFRQEESTGFLGNISSASHGLCSSPAEPSCSHQHLPQEQEPTSEPPVSHCVPPTWPIPA
PPGCLRSHQHASQRAEHARSASFSQGSEAPFIMRRNTAMQNLAQHSGYSVDGVSGHIHGFHSLSKPSQHN
AEFRGSTHRIPWSLASHGHTRGSLTGSEADNEASSGKYTQHGGGNASRPAESMHEGVCSFLPGRTLVGLS
DSIASEGSCVPMNPGSPTLPAVKQAGDDSQGVCIPVGSCLVRFDLLGSPLTELSMHQDLSQGHEVQLPPV
NRSLKPNQKANPTPPNLRNNRVINELSFKPPVTEPWSGTSHTFDSSSSQHPISTQSITNTDSEDSGERYL
FPNPASAFPVSGGTSSSAPPRSTGNIHYAALDFQPSKPSIGSVTSGKKVDYVQVDLEKTQALQKTMHEQM
CLRQSSEPPRGAKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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