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Report for CCDS22367.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22367.1 Public Mus musculus 8 Comp 23 108 98 CCDS HistoryNCBI Gene:12845Re-query CCDS DB by CCDS ID:22367.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22367.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003659.8 ENSMUSP00000003659.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003659.8Link to Ensembl Protein Viewer:ENSMUSP00000003659.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000003659Re-query CCDS DB by Protein ID:ENSMUSP00000003659
Original member Current member NCBI NM_016685.2 NP_057894.2 Accepted alive Link to Nucleotide Sequence:NM_016685.2Link to Protein Sequence:NP_057894.2Re-query CCDS DB by Nucleotide ID:NM_016685Re-query CCDS DB by Protein ID:NP_057894Link to BLAST:NP_057894.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057894.2 755 Q9R0G6 755 100% 0 0

Chromosomal Locations for CCDS 22367.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 70373572 70373647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70373853 70373938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70374373 70374424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70374805 70374974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70375730 70375867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70376042 70376116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70376197 70376355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70376438 70376542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70376636 70376743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70377097 70377256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70378614 70378732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70378898 70378950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70379034 70379215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70379394 70379572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70379681 70379729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70380105 70380301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70381245 70381417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70381672 70381811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70381886 70381932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2268 nt):
ATGGGCCCCACTGCCTGCGTTCTAGTGCTCGCCCTGGCTATCCTGCGGGCGACAGGCCAGGGCCAGATCC
CGCTGGGTGGAGACCTGGCCCCACAGATGCTGCGAGAACTTCAGGAGACTAATGCGGCGCTGCAAGACGT
GAGAGAGCTGTTGCGACAGCAGGTCAAGGAGATCACCTTCCTGAAGAATACGGTGATGGAATGTGATGCT
TGCGGAATGCAGCCCGCACGCACTCCAGGCCTGAGCGTGCGGCCAGTGCCGCTCTGCGCACCCGGCTCCT
GCTTCCCCGGCGTAGTCTGCTCCGAGACAGCTACGGGCGCGCGCTGCGGCCCCTGCCCTCCTGGCTACAC
CGGCAACGGCTCGCACTGCACCGACGTTAATGAGTGCAATGCTCACCCCTGTTTCCCGCGGGTGCGGTGC
ATCAATACCAGCCCTGGCTTTCACTGCGAAGCCTGTCCCCCTGGGTTCAGCGGACCCACCCACGAGGGCG
TGGGACTGACCTTCGCTAAGTCCAACAAACAAGTTTGCACGGATATTAATGAGTGTGAGACCGGGCAGCA
CAATTGCGTTCCCAACTCCGTGTGCGTCAACACCCGGGGCTCCTTCCAGTGCGGCCCCTGCCAGCCCGGT
TTCGTGGGCGACCAGACGTCAGGCTGCCAGCGGCGTGGGCAGCACTTCTGCCCCGATGGGTCACCCAGCC
CGTGCCATGAGAAAGCAAACTGCGTCCTGGAGCGGGATGGCTCGAGGTCTTGCGTGTGTGCAGTTGGCTG
GGCCGGCAACGGGCTCCTGTGCGGCCGCGACACGGACCTGGACGGTTTTCCTGACGAGAAGCTTCGCTGC
TCAGAGCGCCAGTGTCGCAAGGACAACTGCGTGACGGTGCCCAATTCGGGGCAGGAGGATGTGGACCGGG
ACGGCATCGGAGATGCTTGTGACCCGGATGCGGACGGGGATGGAGTCCCTAACGAGCAAGACAATTGCCC
GCTGGTTCGAAACCCAGACCAGCGTAACTCGGACAGTGATAAGTGGGGAGATGCCTGCGACAACTGCCGG
TCCAAGAAGAATGACGATCAGAAAGATACAGACCTGGATGGCCGGGGCGATGCCTGCGACGACGACATAG
ATGGCGACCGAATACGAAATGTAGCTGACAACTGTCCCCGGGTGCCCAACTTTGACCAGAGTGACAGTGA
TGGTGATGGTGTTGGGGATGCCTGTGACAACTGTCCCCAGAAAGATAACCCAGACCAGAGGGATGTGGAC
CACGACTTTGTGGGTGATGCCTGTGATAGTGACCAAGACCAGGATGGGGATGGTCACCAGGACTCCCGGG
ACAACTGCCCCACAGTACCCAACAGTGCCCAGCAGGACTCAGATCATGATGGCAAGGGCGATGCCTGTGA
TGACGATGATGACAATGACGGAGTTCCTGATAGCCGGGACAACTGCCGCTTGGTGCCTAACCCTGGCCAA
GAGGACAATGACCGGGATGGCGTGGGTGACGCGTGTCAGGGTGACTTCGATGCTGACAAGGTTATAGACA
AGATCGATGTGTGCCCCGAGAACGCCGAGGTCACCCTCACCGACTTCAGGGCCTTCCAGACGGTTGTGTT
GGACCCCGAGGGTGATGCGCAGATCGATCCCAACTGGGTGGTGCTCAATCAGGGAATGGAGATCGTTCAG
ACCATGAACAGTGACCCTGGCCTGGCTGTGGGTTACACAGCCTTCAACGGCGTGGACTTCGAGGGCACAT
TCCATGTAAACACCGCCACTGATGATGACTATGCTGGTTTCATCTTCGGCTACCAAGACAGCTCCAGTTT
CTACGTAGTCATGTGGAAACAGATGGAGCAGACGTACTGGCAGGCCAATCCCTTCCGGGCTGTGGCTGAG
CCAGGGATTCAGCTCAAGGCTGTCAAGTCCTCTACAGGTCCCGGGGAACAGCTCCGAAACGCACTGTGGC
ACACGGGGGACACAGCATCCCAGGTGCGGCTGCTGTGGAAGGATCCTCGAAACGTGGGCTGGAAGGATAA
AACATCCTACCGCTGGTTCCTGCAGCACCGGCCTCAAGTTGGCTACATCAGGGTGCGGTTCTATGAGGGT
CCTGAGCTAGTAGCTGACAGCAATGTGGTGTTGGACACGGCCATGCGTGGTGGCCGCCTGGGTGTCTTCT
GCTTCTCCCAAGAGAACATCATCTGGGCTAACCTGCGCTACCGTTGCAATGATACAATCCCTGAGGACTA
CGAGAGTCACCGGCTGCAGAGAGTCTAG

Translation (755 aa):
MGPTACVLVLALAILRATGQGQIPLGGDLAPQMLRELQETNAALQDVRELLRQQVKEITFLKNTVMECDA
CGMQPARTPGLSVRPVPLCAPGSCFPGVVCSETATGARCGPCPPGYTGNGSHCTDVNECNAHPCFPRVRC
INTSPGFHCEACPPGFSGPTHEGVGLTFAKSNKQVCTDINECETGQHNCVPNSVCVNTRGSFQCGPCQPG
FVGDQTSGCQRRGQHFCPDGSPSPCHEKANCVLERDGSRSCVCAVGWAGNGLLCGRDTDLDGFPDEKLRC
SERQCRKDNCVTVPNSGQEDVDRDGIGDACDPDADGDGVPNEQDNCPLVRNPDQRNSDSDKWGDACDNCR
SKKNDDQKDTDLDGRGDACDDDIDGDRIRNVADNCPRVPNFDQSDSDGDGVGDACDNCPQKDNPDQRDVD
HDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSDHDGKGDACDDDDDNDGVPDSRDNCRLVPNPGQ
EDNDRDGVGDACQGDFDADKVIDKIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWVVLNQGMEIVQ
TMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAE
PGIQLKAVKSSTGPGEQLRNALWHTGDTASQVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEG
PELVADSNVVLDTAMRGGRLGVFCFSQENIIWANLRYRCNDTIPEDYESHRLQRV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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