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Report for CCDS1144.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1144.1 Public Homo sapiens 1 IQGAP3 24 110 108 CCDS HistoryNCBI Gene:128239Re-query CCDS DB by CCDS ID:1144.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1144.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361170.7 ENSP00000354451.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361170.7Link to Ensembl Protein Viewer:ENSP00000354451.2Re-query CCDS DB by Nucleotide ID:ENST00000361170Re-query CCDS DB by Protein ID:ENSP00000354451
Original member Current member NCBI NM_178229.5 NP_839943.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178229.5Link to Protein Sequence:NP_839943.3Re-query CCDS DB by Nucleotide ID:NM_178229Re-query CCDS DB by Protein ID:NP_839943Link to BLAST:NP_839943.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_839943.3 1631 Q86VI3 1631 100% 0 0

Chromosomal Locations for CCDS 1144.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 156526486 156526599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156527952 156528060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156528509 156528610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156528916 156529082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156530105 156530317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156531160 156531247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156532980 156533106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156533773 156533875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156534009 156534141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156534501 156534733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156535163 156535247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156537181 156537321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156538809 156539033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156539374 156539537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156539838 156539990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156540708 156540916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156543981 156544050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156544152 156544223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156544389 156544472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156548073 156548243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156548348 156548487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156548581 156548748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156550261 156550351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156551705 156551868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156551974 156552095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156554235 156554392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156556533 156556693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156560934 156561021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156561838 156562001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156562587 156562665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156563134 156563312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156563553 156563666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156563757 156563824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156564615 156564691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156566027 156566104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156566390 156566546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156569376 156569463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156572493 156572529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4896 nt):
ATGGAGAGGAGAGCAGCGGGCCCAGGCTGGGCAGCCTATGAACGCCTCACAGCTGAGGAGATGGATGAGC
AGAGGCGGCAGAATGTTGCCTATCAGTACCTGTGCCGGCTGGAGGAGGCCAAGCGCTGGATGGAGGCCTG
CCTGAAGGAGGAGCTTCCTTCCCCGGTGGAGCTGGAGGAGAGCCTTCGGAATGGAGTGCTGCTGGCCAAG
CTAGGCCACTGTTTTGCACCCTCCGTGGTTCCCTTGAAGAAGATCTACGATGTGGAGCAGCTGCGGTACC
AGGCAACTGGCTTACATTTCCGTCACACAGACAACATCAACTTTTGGCTATCTGCAATAGCCCACATCGG
TCTGCCTTCGACCTTCTTCCCAGAGACCACGGACATCTATGACAAAAAGAACATGCCCCGGGTAGTCTAC
TGCATCCATGCTCTCAGTCTCTTCCTCTTCCGGCTGGGATTGGCCCCTCAGATACATGATCTATACGGGA
AAGTGAAATTCACAGCTGAGGAACTCAGCAACATGGCGTCCGAACTGGCCAAATATGGCCTCCAGCTGCC
TGCCTTCAGCAAGATCGGGGGCATCTTGGCCAATGAGCTCTCGGTGGATGAGGCTGCAGTCCATGCAGCT
GTTCTTGCCATCAATGAAGCAGTGGAGCGAGGGGTGGTGGAGGACACCCTGGCTGCCTTGCAGAATCCCA
GTGCTCTTCTGGAGAATCTCCGAGAGCCTCTGGCAGCCGTCTACCAAGAGATGCTGGCCCAGGCCAAGAT
GGAGAAGGCAGCCAATGCCAGGAACCATGATGACAGAGAAAGCCAGGACATCTATGACCACTACCTAACT
CAGGCTGAAATCCAGGGCAATATCAACCATGTCAACGTCCATGGGGCTCTAGAAGTTGTTGATGATGCCC
TGGAAAGACAGAGCCCTGAAGCCTTGCTCAAGGCCCTTCAAGACCCTGCCCTGGCCCTGCGAGGGGTGAG
GAGAGACTTTGCTGACTGGTACCTGGAGCAGCTGAACTCAGACAGAGAGCAGAAGGCACAGGAGCTGGGC
CTGGTGGAGCTTCTGGAAAAGGAGGAAGTCCAGGCTGGTGTGGCTGCAGCCAACACAAAGGGTGATCAGG
AACAAGCCATGCTCCACGCTGTGCAGCGGATCAACAAAGCCATCCGGAGGAGAGTGGCGGCTGACACTGT
GAAGGAGCTGATGTGCCCTGAGGCCCAGCTGCCTCCAGTGTACCCTGTTGCATCGTCTATGTACCAGCTG
GAGCTGGCAGTGCTCCAGCAGCAGCAGGGGGAGCTTGGCCAGGAGGAGCTCTTCGTGGCTGTGGAGATGC
TCTCAGCTGTGGTCCTGATTAACCGGGCCCTGGAGGCCCGGGATGCCAGTGGCTTCTGGAGCAGCCTGGT
GAACCCTGCCACAGGCCTGGCTGAGGTGGAAGGAGAAAATGCCCAGCGTTACTTCGATGCCCTGCTGAAA
TTGCGACAGGAGCGTGGGATGGGTGAGGACTTCCTGAGCTGGAATGACCTGCAGGCCACCGTGAGCCAGG
TCAATGCACAGACCCAGGAAGAGACTGACCGGGTCCTTGCAGTCAGCCTCATCAATGAGGCTCTGGACAA
AGGCAGCCCTGAGAAGACTCTGTCTGCCCTACTGCTTCCTGCAGCTGGCCTAGATGATGTCAGCCTCCCT
GTCGCCCCTCGGTACCATCTCCTCCTTGTGGCAGCCAAAAGGCAGAAGGCCCAGGTGACAGGGGATCCTG
GAGCTGTGCTGTGGCTTGAGGAGATCCGCCAGGGAGTGGTCAGAGCCAACCAGGACACTAATACAGCTCA
GAGAATGGCTCTTGGTGTGGCTGCCATCAATCAAGCCATCAAGGAGGGCAAGGCAGCCCAGACTGAGCGG
GTGTTGAGGAACCCCGCAGTGGCCCTTCGAGGGGTAGTTCCCGACTGTGCCAACGGCTACCAGCGAGCCC
TGGAAAGTGCCATGGCAAAGAAACAGCGTCCAGCAGACACAGCTTTCTGGGTTCAACATGACATGAAGGA
TGGCACTGCCTACTACTTCCATCTGCAGACCTTCCAGGGGATCTGGGAGCAACCTCCTGGCTGCCCCCTC
AACACCTCTCACCTGACCCGGGAGGAGATCCAGTCAGCTGTCACCAAGGTCACTGCTGCCTATGACCGCC
AACAGCTCTGGAAAGCCAACGTCGGCTTTGTTATCCAGCTCCAGGCCCGCCTCCGTGGCTTCCTAGTTCG
GCAGAAGTTTGCTGAGCATTCCCACTTTCTGAGGACCTGGCTCCCAGCAGTCATCAAGATCCAGGCTCAT
TGGCGGGGTTATAGGCAGCGGAAGATTTACCTGGAGTGGTTGCAGTATTTTAAAGCAAACCTGGATGCCA
TAATCAAGATCCAGGCCTGGGCCCGGATGTGGGCAGCTCGGAGGCAATACCTGAGGCGTCTGCACTACTT
CCAGAAGAATGTTAACTCCATTGTGAAGATCCAGGCATTTTTCCGAGCCAGGAAAGCCCAAGATGACTAC
AGGATATTAGTGCATGCACCCCACCCTCCTCTCAGTGTGGTACGCAGATTTGCCCATCTCTTGAATCAAA
GCCAGCAAGACTTCTTGGCTGAGGCAGAGCTGCTGAAGCTCCAGGAAGAGGTAGTTAGGAAGATCCGATC
CAATCAGCAGCTGGAGCAGGACCTCAACATCATGGACATCAAGATTGGCCTGCTGGTGAAGAACCGGATC
ACTCTGCAGGAAGTGGTCTCCCACTGCAAGAAGCTGACCAAGAGGAATAAGGAACAGCTGTCAGATATGA
TGGTTCTGGACAAGCAGAAGGGTTTAAAGTCGCTGAGCAAAGAGAAACGGCAGAAACTAGAAGCATACCA
ACACCTCTTCTACCTGCTCCAGACTCAGCCCATCTACCTGGCCAAGCTGATCTTTCAGATGCCACAGAAC
AAAACCACCAAGTTCATGGAGGCAGTGATTTTCAGCCTGTACAACTATGCCTCCAGCCGCCGAGAGGCCT
ATCTCCTGCTCCAGCTGTTCAAGACAGCACTCCAGGAGGAAATCAAGTCAAAGGTGGAGCAGCCCCAGGA
CGTGGTGACAGGCAACCCAACAGTGGTGAGGCTGGTGGTGAGATTCTACCGTAATGGGCGGGGACAGAGT
GCCCTGCAGGAGATTCTGGGCAAGGTTATCCAGGATGTGCTAGAAGACAAAGTGCTCAGCGTCCACACAG
ACCCTGTCCACCTCTATAAGAACTGGATCAACCAGACTGAGGCCCAGACAGGGCAGCGCAGCCATCTCCC
ATATGATGTCACCCCGGAGCAGGCCTTGAGCCACCCCGAGGTCCAGAGACGACTGGACATCGCCCTACGC
AACCTCCTCGCCATGACTGATAAGTTCCTTTTAGCCATCACCTCATCTGTGGACCAAATTCCGTATGGGA
TGCGATATGTGGCCAAAGTCCTGAAGGCAACTCTGGCAGAGAAATTCCCTGACGCCACAGACAGCGAGGT
CTATAAGGTGGTCGGGAACCTCCTGTACTACCGCTTCCTGAACCCAGCTGTGGTGGCTCCTGACGCCTTC
GACATTGTGGCCATGGCAGCTGGTGGAGCCCTGGCTGCCCCCCAGCGCCATGCCCTGGGGGCTGTGGCTC
AGCTCCTACAGCACGCTGCGGCTGGCAAGGCCTTCTCTGGGCAGAGCCAGCACCTACGGGTCCTGAATGA
CTATCTGGAGGAAACACACCTCAAGTTCAGGAAGTTCATCCATAGAGCCTGCCAGGTGCCAGAGCCAGAG
GAGCGTTTTGCAGTGGACGAGTACTCAGACATGGTGGCTGTGGCCAAACCCATGGTGTACATCACCGTGG
GGGAGCTGGTCAACACGCACAGGCTGTTGCTGGAGCACCAGGACTGCATTGCCCCTGATCACCAAGACCC
CCTGCATGAGCTCCTGGAGGATCTTGGGGAGCTGCCCACCATCCCTGACCTTATTGGTGAGAGCATCGCT
GCAGATGGGCACACGGACCTGAGCAAGCTAGAAGTGTCCCTGACGCTGACCAACAAGTTTGAAGGACTAG
AGGCAGATGCTGATGACTCCAACACCCGTAGCCTGCTTCTGAGCACCAAGCAGCTGTTGGCCGATATCAT
ACAGTTCCATCCTGGGGACACCCTCAAGGAGATCCTGTCCCTCTCGGCTTCCAGAGAGCAAGAAGCAGCC
CACAAGCAGCTGATGAGCCGACGCCAGGCCTGTACAGCCCAGACACCGGAGCCACTGCGACGACACCGCT
CACTGACAGCTCACTCCCTCCTGCCACTGGCAGAGAAGCAGCGGCGCGTCCTGCGGAACCTACGCCGACT
TGAAGCCCTGGGGTTGGTCAGCGCCAGAAATGGCTACCAGGGGCTAGTGGACGAGCTGGCCAAGGACATC
CGCAACCAGCACAGACACAGGCACAGGCGGAAGGCAGAGCTGGTGAAGCTGCAGGCCACATTACAGGGCC
TGAGCACTAAGACCACCTTCTATGAGGAGCAGGGTGACTACTACAGCCAGTACATCCGGGCCTGCCTGGA
CCACCTGGCCCCCGACTCCAAGAGTTCTGGGAAGGGGAAGAAGCAGCCTTCTCTTCATTACACTGCTGCT
CAGCTCCTGGAAAAGGGTGTCTTGGTGGAAATTGAAGATCTTCCCGCCTCTCACTTCAGAAACGTCATCT
TTGACATCACGCCGGGAGATGAGGCAGGAAAGTTTGAAGTAAATGCCAAGTTCCTGGGTGTGGACATGGA
GCGATTTCAGCTTCACTATCAGGATCTCCTGCAGCTCCAGTATGAGGGTGTGGCTGTCATGAAACTCTTC
AACAAGGCCAAAGTCAATGTCAACCTTCTCATCTTCCTCCTCAACAAGAAGTTTTTGCGGAAGTGA

Translation (1631 aa):
MERRAAGPGWAAYERLTAEEMDEQRRQNVAYQYLCRLEEAKRWMEACLKEELPSPVELEESLRNGVLLAK
LGHCFAPSVVPLKKIYDVEQLRYQATGLHFRHTDNINFWLSAIAHIGLPSTFFPETTDIYDKKNMPRVVY
CIHALSLFLFRLGLAPQIHDLYGKVKFTAEELSNMASELAKYGLQLPAFSKIGGILANELSVDEAAVHAA
VLAINEAVERGVVEDTLAALQNPSALLENLREPLAAVYQEMLAQAKMEKAANARNHDDRESQDIYDHYLT
QAEIQGNINHVNVHGALEVVDDALERQSPEALLKALQDPALALRGVRRDFADWYLEQLNSDREQKAQELG
LVELLEKEEVQAGVAAANTKGDQEQAMLHAVQRINKAIRRRVAADTVKELMCPEAQLPPVYPVASSMYQL
ELAVLQQQQGELGQEELFVAVEMLSAVVLINRALEARDASGFWSSLVNPATGLAEVEGENAQRYFDALLK
LRQERGMGEDFLSWNDLQATVSQVNAQTQEETDRVLAVSLINEALDKGSPEKTLSALLLPAAGLDDVSLP
VAPRYHLLLVAAKRQKAQVTGDPGAVLWLEEIRQGVVRANQDTNTAQRMALGVAAINQAIKEGKAAQTER
VLRNPAVALRGVVPDCANGYQRALESAMAKKQRPADTAFWVQHDMKDGTAYYFHLQTFQGIWEQPPGCPL
NTSHLTREEIQSAVTKVTAAYDRQQLWKANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAH
WRGYRQRKIYLEWLQYFKANLDAIIKIQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAFFRARKAQDDY
RILVHAPHPPLSVVRRFAHLLNQSQQDFLAEAELLKLQEEVVRKIRSNQQLEQDLNIMDIKIGLLVKNRI
TLQEVVSHCKKLTKRNKEQLSDMMVLDKQKGLKSLSKEKRQKLEAYQHLFYLLQTQPIYLAKLIFQMPQN
KTTKFMEAVIFSLYNYASSRREAYLLLQLFKTALQEEIKSKVEQPQDVVTGNPTVVRLVVRFYRNGRGQS
ALQEILGKVIQDVLEDKVLSVHTDPVHLYKNWINQTEAQTGQRSHLPYDVTPEQALSHPEVQRRLDIALR
NLLAMTDKFLLAITSSVDQIPYGMRYVAKVLKATLAEKFPDATDSEVYKVVGNLLYYRFLNPAVVAPDAF
DIVAMAAGGALAAPQRHALGAVAQLLQHAAAGKAFSGQSQHLRVLNDYLEETHLKFRKFIHRACQVPEPE
ERFAVDEYSDMVAVAKPMVYITVGELVNTHRLLLEHQDCIAPDHQDPLHELLEDLGELPTIPDLIGESIA
ADGHTDLSKLEVSLTLTNKFEGLEADADDSNTRSLLLSTKQLLADIIQFHPGDTLKEILSLSASREQEAA
HKQLMSRRQACTAQTPEPLRRHRSLTAHSLLPLAEKQRRVLRNLRRLEALGLVSARNGYQGLVDELAKDI
RNQHRHRHRRKAELVKLQATLQGLSTKTTFYEEQGDYYSQYIRACLDHLAPDSKSSGKGKKQPSLHYTAA
QLLEKGVLVEIEDLPASHFRNVIFDITPGDEAGKFEVNAKFLGVDMERFQLHYQDLLQLQYEGVAVMKLF
NKAKVNVNLLIFLLNKKFLRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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