NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS12626.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12626.1 Public Homo sapiens 19 ZNF428 24 110 108 CCDS HistoryNCBI Gene:126299Re-query CCDS DB by CCDS ID:12626.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12626.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300811.8 ENSP00000300811.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300811.8Link to Ensembl Protein Viewer:ENSP00000300811.2Re-query CCDS DB by Nucleotide ID:ENST00000300811Re-query CCDS DB by Protein ID:ENSP00000300811
Original member Current member NCBI NM_182498.4 NP_872304.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182498.4Link to Protein Sequence:NP_872304.2Re-query CCDS DB by Nucleotide ID:NM_182498Re-query CCDS DB by Protein ID:NP_872304Link to BLAST:NP_872304.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872304.2 188 Q96B54 188 100% 0 0

Chromosomal Locations for CCDS 12626.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43607617 43608107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43614229 43614304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGACAGAGACCCGTGAGCCAGCTGAGACTGGGGGCTACGCCAGCTTGGAAGAAGATGATGAAGACCTTT
CCCCAGGCCCCGAGCATTCCTCTGATTCAGAATACACTCTCTCAGAGCCGGACTCCGAAGAGGAAGAAGA
TGAGGAGGAGGAGGAAGAGGAGACCACTGACGATCCTGAATATGATCCTGGCTACAAGGTGAAGCAGCGC
CTTGGCGGGGGCCGTGGTGGCCCATCCCGCCGGGCCCCCCGTGCAGCCCAGCCCCCGGCCCAGCCTTGCC
AGCTCTGTGGCCGCTCACCCCTTGGGGAGGCCCCACCGGGAACCCCACCCTGCCGGCTCTGCTGCCCTGC
TACAGCCCCCCAGGAAGCACCAGCCCCTGAAGGCAGGGCCCTCGGGGAGGAAGAGGAGGAACCACCTCGG
GCTGGGGAGGGCCGACCAGCTGGGCGGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGAACCTACCACTGTA
CGGAATGTGAGGATTCCTTCGACAACCTGGGGGAGCTGCACGGGCACTTCATGCTGCATGCCCGGGGTGA
GGTGTAG

Translation (188 aa):
MTETREPAETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQR
LGGGRGGPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEEEEEPPR
AGEGRPAGREEEEEEEEEGTYHCTECEDSFDNLGELHGHFMLHARGEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH