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Report for CCDS30336.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30336.1 Public Mus musculus X Fgf16 23 108 98 CCDS HistoryNCBI Gene:80903Re-query CCDS DB by CCDS ID:30336.1Re-query CCDS DB by GeneID:80903See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30336.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033581.3 ENSMUSP00000033581.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033581.3Link to Ensembl Protein Viewer:ENSMUSP00000033581.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000033581Re-query CCDS DB by Protein ID:ENSMUSP00000033581
Original member Current member NCBI NM_030614.2 NP_085117.2 Accepted alive Link to Nucleotide Sequence:NM_030614.2Link to Protein Sequence:NP_085117.2Re-query CCDS DB by Nucleotide ID:NM_030614Re-query CCDS DB by Protein ID:NP_085117Link to BLAST:NP_085117.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_085117.2 207 Q9ESL8 207 100% 0 0

Chromosomal Locations for CCDS 30336.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 105764541 105764814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 105772518 105772621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 105773935 105774180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGGCGGAGGTCGGGGGCGTCTTTGCCTCCTTGGACTGGGACCTGCACGGCTTCTCCTCCTCTCTGGGGA
ACGTGCCCTTAGCTGACTCCCCGGGTTTCCTGAACGAGCGCCTGGGCCAGATCGAGGGGAAGCTGCAGCG
CGGCTCGCCCACAGACTTCGCCCACCTGAAGGGGATCCTGCGGCGCCGCCAGCTCTACTGCCGCACCGGC
TTCCACCTTGAGATCTTCCCCAACGGCACGGTGCACGGCACCCGCCACGACCACAGCCGCTTCGGAATTC
TGGAATTTATCAGCTTGGCTGTGGGGCTGATCAGCATCAGGGGAGTGGACTCTGGCCTGTACCTAGGAAT
GAATGAGCGAGGAGAGCTCTATGGATCGAAGAAACTCACACGTGAATGTGTTTTCCGGGAACAGTTTGAA
GAAAACTGGTACAACACCTATGCCTCCACCTTGTACAAACACTCGGACTCGGAGAGACAGTATTATGTGG
CCCTGAATAAAGACGGCTCACCCCGGGAGGGATACAGGACTAAACGACACCAGAAATTCACTCACTTTTT
ACCAAGGCCAGTAGATCCTTCTAAGTTGCCCTCCATGTCCAGAGATCTCTTCCGCTATAGGTAA

Translation (207 aa):
MAEVGGVFASLDWDLHGFSSSLGNVPLADSPGFLNERLGQIEGKLQRGSPTDFAHLKGILRRRQLYCRTG
FHLEIFPNGTVHGTRHDHSRFGILEFISLAVGLISIRGVDSGLYLGMNERGELYGSKKLTRECVFREQFE
ENWYNTYASTLYKHSDSERQYYVALNKDGSPREGYRTKRHQKFTHFLPRPVDPSKLPSMSRDLFRYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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