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Report for CCDS18351.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18351.1 Public Mus musculus 4 Cdkn2b 23 108 98 CCDS HistoryNCBI Gene:12579Re-query CCDS DB by CCDS ID:18351.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18351.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000097981.5 ENSMUSP00000095595.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097981.5Link to Ensembl Protein Viewer:ENSMUSP00000095595.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000097981Re-query CCDS DB by Protein ID:ENSMUSP00000095595
Original member Current member NCBI NM_007670.4 NP_031696.1 Accepted alive Link to Nucleotide Sequence:NM_007670.4Link to Protein Sequence:NP_031696.1Re-query CCDS DB by Nucleotide ID:NM_007670Re-query CCDS DB by Protein ID:NP_031696Link to BLAST:NP_031696.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031696.1 130 P55271 130 100% 0 0

Chromosomal Locations for CCDS 18351.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 89307054 89307314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 89310666 89310797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (393 nt):
ATGTTGGGCGGCAGCAGTGACGCGGGCCTGGCCACCGCCGCGGCGCGGGGGCAAGTGGAGACGGTGCGGC
AGCTCCTGGAAGCCGGCGCAGATCCCAACGCCCTGAACCGCTTCGGGAGGCGCCCAATCCAGGTCATGAT
GATGGGCAGCGCCCAGGTGGCAGAGCTGCTGCTGCTCCACGGAGCAGAACCCAACTGCGCCGACCCTGCC
ACCCTTACCAGACCTGTGCACGACGCAGCTCGGGAAGGCTTCCTGGACACGCTTGTCGTGCTGCACCGGG
CAGGGGCGCGGCTGGATGTGTGTGACGCCTGGGGCCGCCTGCCGGTAGACTTGGCTGAAGAGCAGGGCCA
CCGTGACATTGCGAGGTATCTGCACGCTGCCACTGGAGATTGA

Translation (130 aa):
MLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSAQVAELLLLHGAEPNCADPA
TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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