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Report for CCDS23559.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23559.1 Public Mus musculus 9 Cdc25a 23 108 98 CCDS HistoryNCBI Gene:12530Re-query CCDS DB by CCDS ID:23559.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23559.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094324.7 ENSMUSP00000091882.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094324.7Link to Ensembl Protein Viewer:ENSMUSP00000091882.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000094324Re-query CCDS DB by Protein ID:ENSMUSP00000091882
Original member NCBI NM_007658.3 NP_031684.3 Updated not alive Link to Nucleotide Sequence:NM_007658.3Link to Protein Sequence:NP_031684.3Re-query CCDS DB by Nucleotide ID:NM_007658Re-query CCDS DB by Protein ID:NP_031684
Current member NCBI NM_007658.4 NP_031684.3 Accepted alive Link to Nucleotide Sequence:NM_007658.4Link to Protein Sequence:NP_031684.3Re-query CCDS DB by Nucleotide ID:NM_007658Re-query CCDS DB by Protein ID:NP_031684Link to BLAST:NP_031684.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031684.3 514 P48964 514 100% 0 0

Chromosomal Locations for CCDS 23559.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 109875990 109876159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109877161 109877234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109878268 109878310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109879231 109879267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109879834 109879935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109881473 109881577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109883489 109883614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109884119 109884193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109884343 109884510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109887248 109887346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109888874 109888936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109889032 109889130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109889711 109889841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109891745 109891856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109892079 109892219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1545 nt):
ATGGAACTGGGCCCGGAGCCCCCCCACCGCCGCCGCCTGTTCTTCGCTTGCAGCCCCACGCCTGCGCCGC
AGCCCACGGGGAAGATGCTGTTTGGCGCGTCAGCTGCTGGCGGACTGTCCCCTGTCACCAACCTGACGGT
CACCATGGACCAGCTGGAAGGACTGGGCAGTGACTGTGAGAAAATGGAAGTGAGAAATAACAGCAGTCTA
CAGAGAATGGGCTCCTCAGAATCGACCGATTCAGGTTTCTGTCTAGATTCTCCTGGGCCCTTGGACAGTA
AAGAAAACCTTGAAATTTCCCTGACGAGAATAAATTCCCTACCTCAGAAGCTCCTGGGATGTAGCCCAGC
CCTGAAGAGGAGCCACTCTGATTCTCTAGACCACGACACCTTTCACCTCATCGACCAGGATGAAAATAAA
GAAAATGAAGCATTTGAATTTAAAAAGCCAATACGACCTGCATCTCGTCACATCTACGAGGAGAGTAAAG
ATCCCTTTACACACAGGCAGAATTCAGCCCCAGCTCGGATGCTATCTTCAAATGAAAGTGAATCAGGAAA
TTTCAGTCCTCTTTTTATACCCCAGTCACCTGTAAAAGCCACTTTGTCCGATGAGGATGATGGCTTCATA
GACCTTCTGGATGGCGAGAATATGAAGAATGATGAGGAGACCCCATCATGCATGGCAAGCCTCTGGACAG
CTCCCCTTGTCATGAGGAGACCTGCAAACCTTGCCGATCGTTGCGGGCTGTTTGACTCCCCTTCCCCGTG
CGGCTCCAGCACTCGGGCGGTGTTGAAGAGAGCAGACCGGTCTCACGAGGAGCCTCCTCGGGGTACAAAG
AGGAGGAAGAGTGTGCCCAGCCCTGTGAAGGCGAAGGCGGATGTTCCGGAGCCCGCCCAGCTTCCATCCC
AGTCTCTATCCCTGATGTCTTCCCCCAAAGGAACCATTGAGAACATTTTGGACAGTGACCCAAGAGACCT
TATAGGAGATTTCTCCAAGGGTTATCTCTTTAATACAGTCTCTGGGAAGCATCAGGATTTGAAATATATT
TCTCCAGAAATTATGGCATCTGTTTTGAATGGCAAGTTTGCCGGTCTCATTAAAGAGTTTGTTATCATTG
ACTGCCGATACCCATATGAGTATGAAGGAGGTCACATCAAGGGTGCCGTGAATCTGCACATGGAAGAAGA
GGTTGAAGACTTCTTACTTAAGAACCCTATTGTGCCTACTGATGGCAAGCGTGTCATTGTCGTGTTCCAC
TGTGAGTTTTCCTCTGAAAGAGGCCCTCGAATGTGCCGATATGTGAGAGAGAGAGATAGGCTCGGCAATG
AGTACCCCAAGCTCCACTACCCTGAGCTGTATGTCCTGAAGGGGGGATACAAGGAGTTCTTTTTGAAGTG
CCAGTCTCACTGTGAACCCCCCAGCTACCGGCCAATGCACCATGAAGACTTTAAAGAAGACCTAAAGAAG
TTCCGCACCAAGAGCCGGACCTGGGCAGGAGAAAAGAGCAAAAGAGAGATGTACAGTCGCCTGAAGAAGC
TCTGA

Translation (514 aa):
MELGPEPPHRRRLFFACSPTPAPQPTGKMLFGASAAGGLSPVTNLTVTMDQLEGLGSDCEKMEVRNNSSL
QRMGSSESTDSGFCLDSPGPLDSKENLEISLTRINSLPQKLLGCSPALKRSHSDSLDHDTFHLIDQDENK
ENEAFEFKKPIRPASRHIYEESKDPFTHRQNSAPARMLSSNESESGNFSPLFIPQSPVKATLSDEDDGFI
DLLDGENMKNDEETPSCMASLWTAPLVMRRPANLADRCGLFDSPSPCGSSTRAVLKRADRSHEEPPRGTK
RRKSVPSPVKAKADVPEPAQLPSQSLSLMSSPKGTIENILDSDPRDLIGDFSKGYLFNTVSGKHQDLKYI
SPEIMASVLNGKFAGLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLKNPIVPTDGKRVIVVFH
CEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFLKCQSHCEPPSYRPMHHEDFKEDLKK
FRTKSRTWAGEKSKREMYSRLKKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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