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Report for CCDS17380.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17380.1 Public Mus musculus 3 Gpr149 23 108 98 CCDS HistoryNCBI Gene:229357Re-query CCDS DB by CCDS ID:17380.1Re-query CCDS DB by GeneID:229357See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17380.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058535.5 ENSMUSP00000060893.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058535.5Link to Ensembl Protein Viewer:ENSMUSP00000060893.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000058535Re-query CCDS DB by Protein ID:ENSMUSP00000060893
Original member Current member NCBI NM_177346.5 NP_796320.2 Accepted alive Link to Nucleotide Sequence:NM_177346.5Link to Protein Sequence:NP_796320.2Re-query CCDS DB by Nucleotide ID:NM_177346Re-query CCDS DB by Protein ID:NP_796320Link to BLAST:NP_796320.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_796320.2 732 Q3UVY1 732 100% 0 0

Chromosomal Locations for CCDS 17380.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 62530536 62531108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62594808 62595256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62602516 62602708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 62603593 62604576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2199 nt):
ATGTCTTTCTTTCTCAGCAACTTAACAAATGACTCTAACCTGTGGAAAGCAAGTCATAATTCTACGGAGA
CGGACCTTATGAATTCACCAGCAACTCTGACTCTTTCTCTCTTTTGCCTGATCTGTATAATGACTCTCGC
AGCTCTGGTGGGCAGCATTTTCTCACTGGTTTCGCTGCTGACCATGCAATACAGAACTGTTTTGTCCATA
CTTGTGACATCTTGGTCTGTGGATGATCTCTTGAGCGTCTTGTCCGTGGCCATCTTCATGGTTTTACAGT
GGCCAAAAGAGGCACAGGGCTACTTCCAGTCTCTGTGCACCACCTCTGCCCTACTGTATATGTGCCAGGG
CCTCTCCAGCAACTTGAAGGCGACTCTCATAGTCTGCTACAACTTTTATACGATGAACAGGACGGTGGAG
AGTCAGTCAAGCTCCTGGCGATTAGGACAGGTACTTGGTGTGACTTTAACCGTTTGGGCAGTCAGCCTGC
TGCTGGCTTCGCTCCCGCTCTGTGGCTGGGGTGTCTTCGTGCGCACGCCTTGGGGCTGCCTGACCGACTG
CTCCAGCCCATACGTGCTGCTCCTCTTCGCGGTATACGCTTCCGCTTTCGGGCTCCTGGCGGTTCTCTCT
GTCCCTCTCACTCACCAGCTGCTGTGTTCGGAGGAACCGCTGAGACTCCATGCCAACTACCAGGAAATTT
CTCGTGGCGCCTCTACTCCTGGGACCCCTGCTGCTGCGGGAAGAGTGCTCTGTCTGCCGCCAGAGGATGT
TGAGATCCCTGCTCTGCGATGCACTGGGGGATGCTCCCCGAGCTCCGACGTGGTGTTTGCCCCGGGTCAG
CCGGCTGCCTCCGGCGCTGGAGCCGGCAGGCGAGAGAATCCCGGGACTCCCCAGGGCACCAACAGCTTCC
CCTTGAGCTTGGCACAGAAGCGCTTTTCTTTGATTCTAGCGCTGACGAAAGTCATCCTTTGGCTACCCAT
GATGATCCACATGGTGGTAAAACACGTGGTGGGGTTTCAGAGCCTTCCGGTCGATATGCTCAGCTTTCTA
CTAAGCCTGCTGGCCAGCAGTGTAACACCAGTGTTTGTCTTATCCAAACGTTGGGCCCACTTGCCTTGTG
GCTGCATCATCAACTGCCAGCCAGACACCTACTCCGTTGCCTTCGATGGGAAAAAGTCGAAGAGGAAAGG
CTTTGAATTCAATCTATCATTCCAACAAAGTTATGGACTCTATAAAATACCACATGCAGATTGCTATGAT
GATGATGAAAATTCCATATCCTATCACAACCCAAAGAATTATGAGTGTGAAGCTACAAAGGAGCCTTGGG
GAGACAACCGCAGTGTCTTCAATACCATCACAGTAGAAATCAGCACCACGCCACCGCTGGACAGCGCCAC
ACTGACGGGTGTCCACAAGTGTACCAATACTGACATCCCAGAATCCAAACAGGCCATGAAAGAGGAAAAG
GGTGCTTTTTCTGTTAAAACAGAAAGCGATATTAACTATGGAGAAACCACCTCTTTTGAAGGTCCAGAGA
GACGACTGTCCCATGAGGAGAATCAGAAACCAGATCTTTCAGACTGGGAATGGTGCAGGAGTAAGTCTGA
ACGAACGCCTCGCCAGCGTTCCGGTGGTGGGCTGGCTATTCCCATATGCGCGTTCCAGGGGACTGTGTCT
CTCCAAGCACCTACTGGGAAAACGCTCTCTCTTTCTACTTATGAGGTCAGCGCAGAAGGGCAAAAGATAA
CCCCAGCCTCTAAGAAAATAGAAGTCTATCGATCTAAAAGTGTTGGCCATGAACCGAACTCAGAGGAGTC
TCCCTCCACGTTTGCGGACACCAGTGTAAAAATACACTTGGAAGTTCTTGAAATTTGTGACAACGATGAG
GCTCTAGACACTGTGTCAATTATCAGCAACATCAGCCAATCCTCCACAAAAGTCAGGTCTCCTTCTCTGC
GCTACTCACGGAAGGAAAACAGATTCGTCTCCTGCGACTTAGGAGAAACTGCCTCATACTCGCTCTTTTT
ACCCACAAGTGATCCTGATGGTGATATTAACATCTCTATCCCTGACACGGTGGAGGCCCACAGACAGAAC
AGCAGGCGGCAGCATGAAGAGAGGGATGGCTACCAGGAAGAGATCCAGTTGTTAAACAAAGCCTACAGGA
AAAGAGAGGCAGAAAGCAAGGGTGATTAG

Translation (732 aa):
MSFFLSNLTNDSNLWKASHNSTETDLMNSPATLTLSLFCLICIMTLAALVGSIFSLVSLLTMQYRTVLSI
LVTSWSVDDLLSVLSVAIFMVLQWPKEAQGYFQSLCTTSALLYMCQGLSSNLKATLIVCYNFYTMNRTVE
SQSSSWRLGQVLGVTLTVWAVSLLLASLPLCGWGVFVRTPWGCLTDCSSPYVLLLFAVYASAFGLLAVLS
VPLTHQLLCSEEPLRLHANYQEISRGASTPGTPAAAGRVLCLPPEDVEIPALRCTGGCSPSSDVVFAPGQ
PAASGAGAGRRENPGTPQGTNSFPLSLAQKRFSLILALTKVILWLPMMIHMVVKHVVGFQSLPVDMLSFL
LSLLASSVTPVFVLSKRWAHLPCGCIINCQPDTYSVAFDGKKSKRKGFEFNLSFQQSYGLYKIPHADCYD
DDENSISYHNPKNYECEATKEPWGDNRSVFNTITVEISTTPPLDSATLTGVHKCTNTDIPESKQAMKEEK
GAFSVKTESDINYGETTSFEGPERRLSHEENQKPDLSDWEWCRSKSERTPRQRSGGGLAIPICAFQGTVS
LQAPTGKTLSLSTYEVSAEGQKITPASKKIEVYRSKSVGHEPNSEESPSTFADTSVKIHLEVLEICDNDE
ALDTVSIISNISQSSTKVRSPSLRYSRKENRFVSCDLGETASYSLFLPTSDPDGDINISIPDTVEAHRQN
SRRQHEERDGYQEEIQLLNKAYRKREAESKGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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