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Report for CCDS16487.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
16487.1 |
Public |
Mus musculus |
2 |
Cd59a |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:12509](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:16487.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 2 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 16487.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000040423.11 |
ENSMUSP00000048041.5 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000040423.11](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000048041.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000040423](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000048041](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000168176.7 |
ENSMUSP00000132774.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000168176.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000132774.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000168176](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000132774](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
|
NCBI |
NM_001111060.2 |
NP_001104530.1 |
Updated |
not alive |
![Link to Nucleotide Sequence:NM_001111060.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001104530.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001111060](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001104530](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
|
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001111060.3 |
NP_001104530.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001111060.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001104530.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001111060](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001104530](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001104530.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
|
NCBI |
NM_007652.5 |
NP_031678.1 |
Updated |
not alive |
![Link to Nucleotide Sequence:NM_007652.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_031678.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_007652](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_031678](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
|
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_007652.6 |
NP_031678.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_007652.6](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_031678.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_007652](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_031678](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_031678.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 16487.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (372 nt): ATGAGAGCTCAGAGGGGACTCATCTTACTCCTGCTGCTTCTGGCTGTGTTCTGTTCCACAGCTGTTAGCC TCACATGCTACCACTGTTTCCAACCGGTGGTTTCTTCATGCAATATGAACAGCACTTGCTCTCCTGACCA GGATTCCTGTCTCTATGCTGTAGCCGGAATGCAAGTGTATCAAAGGTGTTGGAAACAATCAGATTGTCAT GGTGAGATCATTATGGACCAATTAGAAGAGACAAAATTAAAATTCAGATGCTGCCAGTTTAACTTGTGTA ACAAAAGTGACGGATCCTTGGGGAAGACACCATTGCTGGGGACCTCGGTTCTGGTGGCCATTTTGAATCT TTGTTTCTTAAGTCATCTCTAA
Translation (123 aa): MRAQRGLILLLLLLAVFCSTAVSLTCYHCFQPVVSSCNMNSTCSPDQDSCLYAVAGMQVYQRCWKQSDCH GEIIMDQLEETKLKFRCCQFNLCNKSDGSLGKTPLLGTSVLVAILNLCFLSHL
|