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Report for CCDS37682.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37682.1 Public Mus musculus 17 Zbtb14 23 108 98 CCDS HistoryNCBI Gene:22666Re-query CCDS DB by CCDS ID:37682.1Re-query CCDS DB by GeneID:22666See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37682.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062369.13 ENSMUSP00000054897.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062369.13Link to Ensembl Protein Viewer:ENSMUSP00000054897.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000062369Re-query CCDS DB by Protein ID:ENSMUSP00000054897
Original member Current member EBI ENSMUST00000112674.7 ENSMUSP00000108294.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112674.7Link to Ensembl Protein Viewer:ENSMUSP00000108294.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112674Re-query CCDS DB by Protein ID:ENSMUSP00000108294
Original member Current member EBI ENSMUST00000112676.3 ENSMUSP00000108296.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112676.3Link to Ensembl Protein Viewer:ENSMUSP00000108296.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112676Re-query CCDS DB by Protein ID:ENSMUSP00000108296
Original member Current member NCBI NM_001356282.1 NP_001343211.1 Accepted alive Link to Nucleotide Sequence:NM_001356282.1Link to Protein Sequence:NP_001343211.1Re-query CCDS DB by Nucleotide ID:NM_001356282Re-query CCDS DB by Protein ID:NP_001343211Link to BLAST:NP_001343211.1
Original member Current member NCBI NM_001356283.1 NP_001343212.1 Accepted alive Link to Nucleotide Sequence:NM_001356283.1Link to Protein Sequence:NP_001343212.1Re-query CCDS DB by Nucleotide ID:NM_001356283Re-query CCDS DB by Protein ID:NP_001343212Link to BLAST:NP_001343212.1
Original member Current member NCBI NM_009547.3 NP_033573.1 Accepted alive Link to Nucleotide Sequence:NM_009547.3Link to Protein Sequence:NP_033573.1Re-query CCDS DB by Nucleotide ID:NM_009547Re-query CCDS DB by Protein ID:NP_033573Link to BLAST:NP_033573.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001343211.1 449 Q08376 449 100% 0 0
NP_001343212.1 449 Q08376 449 100% 0 0
NP_033573.1 449 Q08376 449 100% 0 0

Chromosomal Locations for CCDS 37682.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 69385502 69385504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 69387312 69388658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1350 nt):
ATGGAGTTTTTCATCAGTATGTCTGAAACCATAAAATATAATGATGATGATCATAAAACGCTGTTTCTGA
AAACACTGAACGAACAGCGCCTGGAGGGAGAATTCTGCGACATCGCCATCGTGGTTGAAGATGTAAAGTT
CCGAGCCCACCGGTGTGTCCTCGCCGCCTGCAGCACGTACTTTAAGAAGCTTTTCAAGAAGCTAGAAGTA
GACAGCTCGTCCGTCATAGAGATAGATTTCCTCCGCTCTGACATATTTGAAGAGGTGCTGAACTACATGT
ACACCGCCAAGATTTCCGTGAAAAAGGAGGACGTCAACTTGATGATGTCGTCCGGGCAGATTCTCGGTAT
CCGGTTTTTGGATAAACTGTGTTCTCAGAAGCGCGATGTGTCTAGTCCGGATGAAAGTAACGGCCAGTCG
AAGAGTAAGTATTGCCTCAAACTAAACCGCCCCATCGGAGACGCTGCTGATGCTCAGGACGATGATGTGG
AAGAAATCGGGGACCAAGATGACAGCCCTTCTGATGACACGGTAGAGGGCACTCCCCCGAGTCAAGAGGA
CGGCAAGTCTCCCACAACCACTCTCAGGGTTCAGGAAGCAATTTTGAAAGAGCTGGGGAGTGAGGAAGTT
CGGAAAGTGAACTGTTACGGCCAGGAAGTGGAGTCCATGGAGACTCCCGAATCCAAAGATCTGGGCTCTC
AGACCCCTCAGGCCTTAACCTTTAATGATGGGATGAGCGAAGTAAAAGATGAACAGACTCCGGGCTGGAC
CACGGCGGCCAGCGACATGAAGTTCGAGTACTTGCTCTACGGTCACCATCGAGAGCAGATCGCCTGCCAG
GCGTGTGGGAAGACGTTCTCCGATGAAGGCCGGCTGAGGAAACATGAGAAGCTCCACACCGCTGACAGGC
CGTTTGTCTGTGAGATGTGCACAAAAGGTTTCACCACCCAGGCCCACCTGAAAGAACACCTAAAAATCCA
TACAGGGTACAAACCCTACAGCTGCGAGGTGTGCGGAAAGTCATTCATCCGCGCCCCAGACCTGAAGAAG
CACGAGAGGGTTCACAGCAACGAAAGACCATTTGCGTGTCACATGTGTGACAAAGCCTTCAAACACAAGT
CTCACCTCAAGGACCACGAGAGAAGACACAGAGGGGAAAAGCCTTTTGTGTGTGGCTCCTGCACCAAGGC
CTTCGCCAAGGCCTCAGACCTGAAGAGGCATGAGAACAATATGCACAGTGAGAGGAAACAGGTCACCCCC
AGTGCCATCCAGAGTGAGACAGAACAGTTGCAGGCCGCAGCCATGGCCGCTGAGGCTGAGCAGCAGCTGG
AGACAATTGCCTGTAGCTAG

Translation (449 aa):
MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTYFKKLFKKLEV
DSSSVIEIDFLRSDIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFLDKLCSQKRDVSSPDESNGQS
KSKYCLKLNRPIGDAADAQDDDVEEIGDQDDSPSDDTVEGTPPSQEDGKSPTTTLRVQEAILKELGSEEV
RKVNCYGQEVESMETPESKDLGSQTPQALTFNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQIACQ
ACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYSCEVCGKSFIRAPDLKK
HERVHSNERPFACHMCDKAFKHKSHLKDHERRHRGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTP
SAIQSETEQLQAAAMAAEAEQQLETIACS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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