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Report for CCDS22661.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22661.1 Public Mus musculus 8 Calb2 23 108 98 CCDS HistoryNCBI Gene:12308Re-query CCDS DB by CCDS ID:22661.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22661.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003754.7 ENSMUSP00000003754.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003754.7Link to Ensembl Protein Viewer:ENSMUSP00000003754.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000003754Re-query CCDS DB by Protein ID:ENSMUSP00000003754
Original member Current member NCBI NM_007586.2 NP_031612.1 Accepted alive Link to Nucleotide Sequence:NM_007586.2Link to Protein Sequence:NP_031612.1Re-query CCDS DB by Nucleotide ID:NM_007586Re-query CCDS DB by Protein ID:NP_031612Link to BLAST:NP_031612.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031612.1 271 Q08331 271 100% 0 0

Chromosomal Locations for CCDS 22661.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 110143084 110143200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110145652 110145723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110147301 110147354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110147615 110147654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110148043 110148098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110148514 110148591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110149356 110149412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110152630 110152710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110154653 110154742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110156920 110156996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110168044 110168137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (816 nt):
ATGGCTGGCCCGCAGCAGCAGCCCCCTTACCTGCACCTGGCCGAGCTGACTGCATCCCAGTTCCTGGAAA
TCTGGAAGCACTTTGATGCTGACGGAAATGGGTACATTGAAGGTAAAGAGCTAGAGAACTTCTTCCAGGA
GCTGGAGAAGGCAAGGAAGGGTTCTGGCATGATGTCCAAGAGCGACAATTTTGGAGAGAAGATGAAGGAG
TTCATGCAGAAGTATGATAAGAACTCAGATGGGAAAATTGAGATGGCGGAGCTGGCGCAGATCCTGCCGA
CCGAAGAGAATTTCCTTTTGTGCTTCAGGCAGCACGTGGGCTCCAGCGCTGAGTTTATGGAGGCTTGGCG
GAAGTATGACACAGACAGAAGTGGCTACATCGAAGCCAATGAGCTCAAGGGATTCCTGTCTGACCTCCTG
AAGAAGGCCAACAGGCCCTATGATGAACCTAAGCTCCAGGAGTACACCCAGACCATACTACGGATGTTTG
ACTTAAATGGAGATGGCAAATTGGGTCTCTCAGAGATGTCTAGACTCTTGCCTGTACAAGAGAACTTCCT
GCTGAAATTTCAGGGTATGAAGCTGACCTCAGAAGAGTTCAATGCCATCTTCACATTTTATGACAAGGAT
GGAAGCGGCTATATTGATGAGAATGAACTGGACGCCCTCCTGAAGGATCTGTATGAGAAGAACAAGAAGG
AGATGAACATCCAACAGCTCACCACCTACAGGAAGAGTGTCATGTCCTTGGCCGAGGCAGGGAAGCTCTA
CAGAAAGGACCTGGAGATTGTGCTCTGCAGTGAGCCCCCCGTGTAA

Translation (271 aa):
MAGPQQQPPYLHLAELTASQFLEIWKHFDADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGEKMKE
FMQKYDKNSDGKIEMAELAQILPTEENFLLCFRQHVGSSAEFMEAWRKYDTDRSGYIEANELKGFLSDLL
KKANRPYDEPKLQEYTQTILRMFDLNGDGKLGLSEMSRLLPVQENFLLKFQGMKLTSEEFNAIFTFYDKD
GSGYIDENELDALLKDLYEKNKKEMNIQQLTTYRKSVMSLAEAGKLYRKDLEIVLCSEPPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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