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Report for CCDS30150.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30150.1 Public Mus musculus X Brs3 23 108 98 CCDS HistoryNCBI Gene:12209Re-query CCDS DB by CCDS ID:30150.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30150.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033464.3 ENSMUSP00000033464.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033464.3Link to Ensembl Protein Viewer:ENSMUSP00000033464.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000033464Re-query CCDS DB by Protein ID:ENSMUSP00000033464
Original member Current member NCBI NM_009766.3 NP_033896.2 Accepted alive Link to Nucleotide Sequence:NM_009766.3Link to Protein Sequence:NP_033896.2Re-query CCDS DB by Nucleotide ID:NM_009766Re-query CCDS DB by Protein ID:NP_033896Link to BLAST:NP_033896.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033896.2 399 O54798 399 100% 0 0

Chromosomal Locations for CCDS 30150.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 57043245 57043678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 57045217 57045568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 57046944 57047357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1200 nt):
ATGTCTCAAAGGCAGTCTCAGTCACCTAATCAGACTTTAATTTCCATTACAAATGACACAGAAACATCAA
GCTCTGTCGTCTCCAACGATACTACACATAAAGGATGGACCGGAGACAACTCTCCAGGAATAGAAGCACT
GTGTGCCATCTATATCACTTATGCTGGGATCATTTCAGTGGGCATCCTCGGAAATGCTATCCTCATCAAA
GTCTTTTTCAAGACTAAATCCATGCAAACAGTTCCAAATATTTTCATCACCAGCCTGGCTTTCGGAGACC
TGTTACTTCTGCTGACTTGTGTGCCTGTGGATGCAACCCACTACCTGGCAGAAGGATGGCTGTTTGGAAA
GGTCGGTTGTAAAGTGCTTTCCTTCATCCGGCTCACTTCTGTCGGTGTGTCAGTGTTCACGCTAACAATT
CTCAGCGCTGACAGATACAAAGCAGTCGTGAAGCCACTTGAGCGACAGCCCCCCAATGCCATTCTGAAGA
CCTGTGCAAAAGCTGGTGGCATCTGGATCGTGTCTATGATATTTGCTCTGCCAGAGGCTATATTCTCAAA
TGTATACACTTTCCAAGATCCTAACAGAAATGTGACATTTGAATCATGTAACTCCTACCCTATCTCTGAG
AGGCTTTTGCAAGAAATACATTCTCTGTTGTGTTTCTTGGTATTCTACATTATCCCGCTCTCGATTATCT
CTGTCTATTATTCTTTGATTGCCAGGACTCTTTACAAAAGCACCCTGAACATACCGACTGAGGAACAAAG
CCATGCCCGAAAGCAGATTGAATCCCGGAAGAGAATTGCCAAAACAGTTTTGGTGCTGGTGGCTCTGTTC
GCACTCTGCTGGTTGCCGAATCATCTCCTGTATCTCTACCACTCCTTCACTTATGAAAGCTATGCAAACC
ACTCTGATGTCCCTTTTGTTATCATCATTTTCTCTCGGGTGCTGGCTTTCAGTAATTCCTGCGTGAACCC
CTTTGCTCTCTATTGGCTGAGCAAGACCTTCCAGCAGCATTTTAAAGCTCAGCTCTGCTGCCTCAAGGCA
GAGCAGCCTGAGCCTCCTCTTGGTGACATCCCCCTTAACAACCTCACTGTGATGGGGCGGGTCCCAGCTA
CTGGGAGTGCACATGTCTCTGAAATTAGTGTGACCCTGTTCAGTGGCAGTAGTGCCAAGAAGGGAGAGGA
CAAAGTTTAG

Translation (399 aa):
MSQRQSQSPNQTLISITNDTETSSSVVSNDTTHKGWTGDNSPGIEALCAIYITYAGIISVGILGNAILIK
VFFKTKSMQTVPNIFITSLAFGDLLLLLTCVPVDATHYLAEGWLFGKVGCKVLSFIRLTSVGVSVFTLTI
LSADRYKAVVKPLERQPPNAILKTCAKAGGIWIVSMIFALPEAIFSNVYTFQDPNRNVTFESCNSYPISE
RLLQEIHSLLCFLVFYIIPLSIISVYYSLIARTLYKSTLNIPTEEQSHARKQIESRKRIAKTVLVLVALF
ALCWLPNHLLYLYHSFTYESYANHSDVPFVIIIFSRVLAFSNSCVNPFALYWLSKTFQQHFKAQLCCLKA
EQPEPPLGDIPLNNLTVMGRVPATGSAHVSEISVTLFSGSSAKKGEDKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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