NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32719.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32719.1 Public Homo sapiens 17 BTBD17 24 110 108 CCDS HistoryNCBI Gene:388419Re-query CCDS DB by CCDS ID:32719.1Re-query CCDS DB by GeneID:388419See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32719.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375366.4 ENSP00000364515.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375366.4Link to Ensembl Protein Viewer:ENSP00000364515.3Re-query CCDS DB by Nucleotide ID:ENST00000375366Re-query CCDS DB by Protein ID:ENSP00000364515
Original member Current member NCBI NM_001080466.2 NP_001073935.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080466.2Link to Protein Sequence:NP_001073935.1Re-query CCDS DB by Nucleotide ID:NM_001080466Re-query CCDS DB by Protein ID:NP_001073935Link to BLAST:NP_001073935.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073935.1 478 A6NE02 478 100% 0 0

Chromosomal Locations for CCDS 32719.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 74356657 74357731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74359969 74360245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74361735 74361819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1437 nt):
ATGCCTAGGAGAGGCTACTCCAAGCCTGGGTCCTGGGGCAGCTTCTGGGCCATGCTGACCTTGGTGGGCC
TGGTCACCCATGCAGCACAGAGAGCCGATGTTGGCGGGGAGGCAGCTGGCACCTCCATCAACCACTCCCA
GGCGGTGCTCCAGCGCTTGCAGGAGCTGCTGCGGCAGGGCAACGCCAGCGATGTGGTTCTGCGGGTGCAG
GCTGCGGGCACCGATGAGGTCCGGGTATTCCACGCCCACCGCCTGCTGCTGGGACTGCACAGTGAGCTGT
TCCTGGAGCTGCTAAGTAACCAGAGCGAGGCGGTGCTGCAGGAGCCACAGGACTGCGCCGCTGTCTTCGA
CAAGTTCATCAGGTACCTGTACTGCGGGGAGCTGACCGTGCTGCTGACCCAGGCCATCCCCCTGCACAGA
CTGGCCACCAAGTACGGCGTGTCCTCCCTGCAGCGCGGCGTGGCCGACTACATGCGCGCGCACCTGGCGG
GAGGCGCGGGCCCGGCGGTGGGCTGGTACCACTACGCGGTGGGCACCGGGGACGAGGCCCTGCGCGAGAG
CTGCCTGCAGTTCCTGGCCTGGAACCTGTCGGCCGTGGCGGCCAGCACCGAGTGGGGCGCCGTGAGCCCC
GAGCTGCTCTGGCAGCTCCTGCAACGCTCGGACCTGGTGCTGCAGGATGAACTGGAGCTGTTCCACGCGC
TGGAGGCCTGGCTGGGTCGCGCGCGGCCGCCCCCTGCCGTGGCCGAGCGGGCGCTGCGCGCCATACGCTA
CCCCATGATCCCACCGGCACAGCTGTTCCAGCTGCAGGCGCGCTCGGCAGCCCTGGCGCGCCACGGCCCC
GCGGTGGCCGACCTCCTGCTGCAGGCCTACCAGTTCCACGCCGCGTCGCCGCTGCACTACGCCAAGTTCT
TCGACGTCAACGGCAGCGCCTTCCTGCCCCGCAACTACCTCGCGCCCGCCTGGGGCGCCCCGTGGGTCAT
CAACAACCCGGCCCGCGACGACCGCAGCACCAGCTTCCAGACGCAGCTGGGCCCGAGTGGCCACGACGCG
GGCCGCCGGGTCACCTGGAACGTGCTCTTCTCGCCGCGCTGGCTGCCCGTCAGCCTGCGGCCCGTTTACG
CGGACGCCGCGGGCACTGCTCTGCCCGCCGCGCGCCCGGAGGACGGCCGACCGCGGCTGGTGGTGACGCC
GGCCAGCAGCGGCGGCGACGCGGCGGGCGTGAGCTTCCAGAAGACGGTGCTGGTGGGGGCGCGCCAGCAG
GGCCGCCTGCTGGTCCGCCACGCCTACAGCTTCCACCAGAGCAGCGAGGAGGCCGGCGACTTCCTGGCGC
ACGCCGACCTGCAGCGGCGCAACTCCGAGTACCTGGTTGAGAACGCCCTGCACCTGCACCTCATCGTCAA
GCCCGTATACCACACCCTTATCCGGACCCCCAAGTAG

Translation (478 aa):
MPRRGYSKPGSWGSFWAMLTLVGLVTHAAQRADVGGEAAGTSINHSQAVLQRLQELLRQGNASDVVLRVQ
AAGTDEVRVFHAHRLLLGLHSELFLELLSNQSEAVLQEPQDCAAVFDKFIRYLYCGELTVLLTQAIPLHR
LATKYGVSSLQRGVADYMRAHLAGGAGPAVGWYHYAVGTGDEALRESCLQFLAWNLSAVAASTEWGAVSP
ELLWQLLQRSDLVLQDELELFHALEAWLGRARPPPAVAERALRAIRYPMIPPAQLFQLQARSAALARHGP
AVADLLLQAYQFHAASPLHYAKFFDVNGSAFLPRNYLAPAWGAPWVINNPARDDRSTSFQTQLGPSGHDA
GRRVTWNVLFSPRWLPVSLRPVYADAAGTALPAARPEDGRPRLVVTPASSGGDAAGVSFQKTVLVGARQQ
GRLLVRHAYSFHQSSEEAGDFLAHADLQRRNSEYLVENALHLHLIVKPVYHTLIRTPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH