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Report for CCDS31361.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31361.2 Public Homo sapiens 11 OR51F2 24 110 108 CCDS HistoryNCBI Gene:119694Re-query CCDS DB by CCDS ID:31361.2See the combined annotation on chromosome 11 in Sequence Viewer

Public Note for CCDS 31361.1
The coding region has been updated to start at an alternate in-frame start codon that is supported by conservation data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 31361.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322110.8 ENSP00000323952.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322110.8Link to Ensembl Protein Viewer:ENSP00000323952.5Re-query CCDS DB by Nucleotide ID:ENST00000322110Re-query CCDS DB by Protein ID:ENSP00000323952
Original member Current member NCBI NM_001004753.2 NP_001004753.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004753.2Link to Protein Sequence:NP_001004753.2Re-query CCDS DB by Nucleotide ID:NM_001004753Re-query CCDS DB by Protein ID:NP_001004753Link to BLAST:NP_001004753.2

Chromosomal Locations for CCDS 31361.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 4821422 4822414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGTCGGTCCTCAATAATACCATTGCTGAGCCTCTGATCTTCCTCCTGATGGGCATTCCAGGCCTGAAAG
CC
ACCCAGTACTGGATCTCCATCCCTTTTTGTCTCCTATATGTTGTTGCCGTCTCTGGAAATAGCATGAT
C
CTGTTTGTGGTCCTCTGTGAACGGAGCCTCCATAAGCCTATGTACTATTTCCTCTCTATGCTTTCAGCC
ACA
GACCTGAGCTTGTCCCTGTGTACACTTTCTACTACCCTTGGTGTCTTCTGGTTTGAAGCCCGAGAAA
TC
AACCTAAATGCCTGCATTGCCCAGATGTTCTTTCTACACGGATTTACTTTCATGGAGTCTGGGGTTCT
A
CTGGCCATGGCCTTTGATCGTTTTGTGGCCATCTGTTACCCACTGAGATACACTACCATCCTTACCAAT
GCC
CGAATTGCCAAGATTGGGATGAGCATGTTGATAAGAAATGTTGCCGTCATGTTGCCAGTCATGCTCT
TT
GTCAAGAGGTTGTCCTTCTGCAGTTCTATGGTCCTTTCACATTCTTACTGCTACCATGTTGATCTCAT
C
CAACTCTCCTGCACAGACAATAGGATCAACAGCATCCTTGGTCTGTTTGCGCTTTTGTCCACTACAGGG
TTT
GACTGCCCTTGCATCCTGCTCTCCTATATCCTGATCATTCGATCTGTCCTCAGCATTGCTTCCTCAG
AA
GAGAGGCGGAAAGCCTTCAACACCTGCACATCCCACATCAGTGCTGTTTCCATCTTCTACCTCCCTCT
C
ATCAGTTTGTCTCTTGTCCATCGCTATGGCCATTCAGCACCTCCATTTGTCCACATCATCATGGCCAAT
GTC
TTTCTGCTAATCCCTCCTGTGCTCAACCCTATTATTTACAGTGTAAAGATTAAGCAGATTCAAAAGG
CC
ATTATCAAGGTCTTAATTCAGAAGCACTCCAAATCTAATCATCAGCTATTTCTGATTAGAGATAAAGC
C
ATTTATGAATAA


Translation (330 aa):
MSVLNNTIAEPLIFLLMGIPGLKATQYWISIPFCLLYVVAVSGNSMILFVVLCERSLHKPMYYFLSMLSA
T
DLSLSLCTLSTTLGVFWFEAREINLNACIAQMFFLHGFTFMESGVLLAMAFDRFVAICYPLRYTTILTN
A
RIAKIGMSMLIRNVAVMLPVMLFVKRLSFCSSMVLSHSYCYHVDLIQLSCTDNRINSILGLFALLSTTG
F
DCPCILLSYILIIRSVLSIASSEERRKAFNTCTSHISAVSIFYLPLISLSLVHRYGHSAPPFVHIIMAN
V
FLLIPPVLNPIIYSVKIKQIQKAIIKVLIQKHSKSNHQLFLIRDKAIYE




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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