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Report for CCDS39139.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39139.1 Public Mus musculus 5 Mob1b 23 108 98 CCDS HistoryNCBI Gene:68473Re-query CCDS DB by CCDS ID:39139.1Re-query CCDS DB by GeneID:68473See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39139.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006424.7 ENSMUSP00000006424.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006424.7Link to Ensembl Protein Viewer:ENSMUSP00000006424.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000006424Re-query CCDS DB by Protein ID:ENSMUSP00000006424
Original member Current member NCBI NM_026735.2 NP_081011.1 Accepted alive Link to Nucleotide Sequence:NM_026735.2Link to Protein Sequence:NP_081011.1Re-query CCDS DB by Nucleotide ID:NM_026735Re-query CCDS DB by Protein ID:NP_081011Link to BLAST:NP_081011.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081011.1 216 Q8BPB0 216 100% 0 0

Chromosomal Locations for CCDS 39139.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 88721108 88721121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 88743304 88743470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 88745057 88745150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 88749525 88749658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 88753160 88753323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 88756095 88756172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (651 nt):
ATGAGCTTCTTGTTTGGTAGTCGCTCTTCTAAAACTTTTAAACCAAAGAAGAACATACCAGAGGGGTCTC
ACCAGTATGAACTCTTAAAGCATGCGGAAGCCACACTGGGCAGCGGCAACCTACGGATGGCTGTCATGCT
TCCCGAGGGAGAGGATCTGAATGAGTGGGTTGCAGTTAACACTGTGGATTTTTTCAATCAAATCAATATG
CTTTATGGAACCATCACAGACTTCTGTACAGAGGAGAGCTGTCCGGTGATGTCAGCTGGACCAAAATATG
AATATCACTGGGCAGATGGAACAAACATAAAAAAGCCTATTAAGTGTTCTGCACCAAAGTATATTGATTA
CTTGATGACTTGGGTTCAGGACCAGCTGGATGATGAGACATTATTTCCATCAAAAATTGGTGTTCCATTC
CCGAAGAATTTCATGTCAGTGGCAAAAACAATACTCAAACGACTCTTTAGAGTTTATGCTCATATTTATC
ACCAACATTTTGACCCTGTGATCCAGCTTCAGGAGGAAGCACATCTCAATACATCTTTCAAGCACTTTAT
TTTTTTCGTTCAGGAGTTCAACCTTATTGACAGACGAGAGTTGGCACCACTGCAAGAGCTGATTGAAAAA
CTCACCTCAAAGGACAGATAA

Translation (216 aa):
MSFLFGSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRMAVMLPEGEDLNEWVAVNTVDFFNQINM
LYGTITDFCTEESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPF
PKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEK
LTSKDR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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