NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS36753.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36753.1 Public Mus musculus 13 Iqgap2 23 108 98 CCDS HistoryNCBI Gene:544963Re-query CCDS DB by CCDS ID:36753.1Re-query CCDS DB by GeneID:544963See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36753.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068603.7 ENSMUSP00000067685.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068603.7Link to Ensembl Protein Viewer:ENSMUSP00000067685.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000068603Re-query CCDS DB by Protein ID:ENSMUSP00000067685
Original member Current member NCBI NM_027711.1 NP_081987.1 Accepted alive Link to Nucleotide Sequence:NM_027711.1Link to Protein Sequence:NP_081987.1Re-query CCDS DB by Nucleotide ID:NM_027711Re-query CCDS DB by Protein ID:NP_081987Link to BLAST:NP_081987.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081987.1 1575 Q3UQ44 1575 100% 0 0

Chromosomal Locations for CCDS 36753.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 95628007 95628120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95628947 95629055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95629989 95630126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95632024 95632184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95635464 95635676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95637718 95637805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95646762 95646903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95648178 95648280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95657803 95657935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95660118 95660350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95660999 95661083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95661587 95661727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95664063 95664287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95665593 95665756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95668368 95668517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95671229 95671437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95672985 95673054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95673685 95673756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95675314 95675397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95682153 95682323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95682910 95683052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95684854 95685021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95689701 95689791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95707878 95708041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95716057 95716181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95721513 95721673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95724546 95724709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95729463 95729550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95731280 95731458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95732891 95733004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95733884 95733951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95746438 95746514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95749993 95750070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95763246 95763402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95837824 95837923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95891664 95891709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4728 nt):
ATGCCGCACGAAGAGCTGCCGTCGTTGCAACGGCCCCGCTACGGCTCAATCGTGGATGATGAAAGGCTGT
CTGCAGAGGAGATGGATGAGAGGAGGCGACAGAACATCGCCTATGAATACTTGTGTCACCTGGAGGAAGC
CAAGAGATGGATGGAAGTCTGCTTAGTTGAAGAATTGCCACCAACCACTGAACTGGAAGAAGGGCTCCGG
AATGGGGTCTACCTCGCCAAGTTAGCCAAGTTCTTCGCTCCAAAAATGGTATCAGAGAAGAAGATCTACG
ATGTGGAGCAGACACGTTATAAGAAATCTGGCCTTCATTTTCGACACACAGATAACACTGTGCAGTGGTT
AAGAGCTATGGAAGCCATCGGGCTGCCCAAGATATTTTATCCAGAAACAACAGATGTCTACGATCGGAAA
AACATACCAAGGATGATCTATTGCATTCACGCGCTAAGTTTGTATCTGTTTAAACTGGGGATTGCGCCCC
AGATCCAGGATTTGCTGGGAAAAGTGGATTTCACAGAGGAGGAGATCAGTAACATGAGGAAAGAACTGGA
GAAGTACGGGATCCAGATGCCGGCTTTCAGCAAAATCGGTGGCATTCTGGCCAATGAACTGTCTGTGGAC
GAAGCTGCACTACATGCTGCAGTCATAGCTATTAATGAGGCTATTGAAAAGGGAGTGGCCAAGCAGACCA
TTATAACACTAAGAAACCCCAACGCAGTGTTAACTTGTGTGGACGACAGCCTCTCACAGGAGTACCAGAA
AGAACTGTGGGAAGCCAAAAAGAAAAAAGAGGAAAGCGCAAAACTGAAGAACAGCTGTATTTCAGAGGAA
GAGAGAGATGCGTATGAGGAGCTGCTGACCCAGGCAGAAATTCAAAGCAACATCAGTACCGTCAACAGGA
TGGCTGCTGTGGACCACATCAATGCTGTCCTTCAGGAAGGTGACCCCGAGAACACACTGCTTGCACTGAA
GAAACCAGAAGCCCAGCTGCCAGCTGTCTATCCCTTTGCTGCTGTTATGTATCAAAATGAACTCTTCAAC
CTCCAGAAACAGAACACATCGAACTACTTGGCCCACGAGGAGCTCCTGATTGCCGTGGAAATGTTGTCTG
CCGTTGCTCTGCTAAACCAGGCCTTGGAGAGCAGTGACCTCGTGGCTGTGCAGAACCAACTCAGAAGCCC
CACCATAGGCTTCAACAATCTGGATGAGGCACACGTGGACCGTTATGCAGACGCACTACTCTCTGTTAAA
CAAGAAGCATTATCCCAAGGGCAAGATACCTTAAGCTGGAATGAAATTCAGAATTGTATCGATATGATTA
ATAACCAGATTCAAGAAGAAAATGACCGAATGGTAGTTCTCGGGTACATCAATGAAGCCATCGACGCAGG
GAACCCTCTGAAGACTTTAGATACCTTGCTGCTGCCCACTGCTAATATCAGAGATGTGGACCCAGACTGC
GCCCAACACTACCAGGATGTTCTGTTCTATACAAAATCCCAGAAACTCGGGGATCCTAAGAATGTTTCTA
AAGTTCTCTGGCTGGATGAGATACAGCAAGCCATCAATGAGGCCAACGTGGATGAGAACAGAGCAAAGCA
ATGGGTTACACTGGTCGTTGACGTGAATGAGTGTTTGGATAGAAAACAATCAGATCACATCTTGACTGCA
CTCAAGTCTTCTCCTAGCAATATCCATAACATACTCCCAGAATGTGCCAACAAGTACTATGATACCCTTG
TGAAGGCGAAAGAGTCAAAGACTGACAATGAGTCCAGTGAAGGTTCATGGGTCACACTCAACGTGCAAGA
GAAATATAACTACTATTACAACACGGATTCCAAAGAAGGCTCTTGGGTTCCACCCGAATTATGCTTGTCT
AAAGAATCATGGCTCACGGGAGAGGAAATTGAGGACATTGTGGAGGAGGTCACATCAGATTACATCCGGG
AGAAGCTGTGGTCTGCTTCAGAAGACTTGCTTGTCCGCTTCGAGGCCACAACCTTGGGACCTGCCCTTAG
GGAGGAATTTGAAGCTAGGAAAGCATTCTTATATGAACAAACAGAGAGCGTGGTCAAAATCCAGGCTTTC
TGGAAGGGGTTCAAACAACGCCAGGAATATCTGCACAGACAACAGGTGTTTGCTGGTAACGTTGATTCTG
TTGTGAAGATTCAGTCCTGGTTCCGAATGGTGACAGCAAGGAAGAGTTATCTTTCACGACTGCGGTATTT
TGAAGATCATAAAAATGAAATTGTGAAAATACAATCCCTGTTACGGGCAAGCAAAGCCAGAGACGACTAC
AAAGCACTAGTTGGCTCCGAAAACCCACCATTAACAGTAATCCGAAAGTTCGTGTACCTGTTGGACCAGA
GTGACTTGGATTTCCAGGAGGAGCTGGAGGTAGCCAGGCTACGAGAAGAAGTAGTGACGAAGATCAGGGC
CAATCAGCAGCTGGAGAAGGACTTGAACCTAATGGACATCAAGATTGGACTGCTGGTGAAGAACAGGATT
ACGCTGGAGGATGTAATCTCACACAGAAAAAAGCTGAATAAGAAAAAAGGTGGTGAAATAGAAATACTGA
ATAACACTGACAACAAGGGAATTAAAAGCTTGAGTAAGGAGAGACGGAAAACACTGGAGACCTACCAGCA
ACTGTTCTACCTCCTCCAGACCAAACCTTCATACCTGGCTAAGCTGATTTTCCAGATGCCACAGAACAAG
TCGACGAAATTCATGGACACGGTTATCTTCACTCTATACAATTACGCCTCTAACCAGAGGGAAGAATACC
TGTTGCTCAAGCTCTTCAAAACTGCGCTGGAGGAAGAAATCAAATCAAAGGTGGACCAGGTACAAGACAT
AGTGACAGGCAACCCTACAGTCATCAAGATGGTTGTCAGCTTCAACAGAGGCGCCCGGGGACAGAACACC
CTGCGCCAGCTCCTGGCACCAGTGGTGAAAGAGATCATTGAGGACAAGGCCCTGGTCATTAACACCAACC
CTGTGGAGGTGTACAAGGCTTGGGTGAACCAACTGGAAACGCAGACTGGAGAAGCCAGCAAGCTGCCTTA
CGACGTCACCACAGAGCAAGCCCTGACATACCCGGAGGTGAAGAATAAACTGGAGGCATCTATTGAAAAC
CTGAGGAAGGTCACCGACAAAGTCCTGGGCTCCATCATTTCTTCCCTCGATCTGCTGCCTTATGGATTGA
GGTATATAGCCAAAGTACTGAAGAACTCGATCCGTGAGAAATTCCCCGATGCCACGGAAGAAGAGCTGTT
AAAGATTGTTGGAAATCTCCTATACTACCGGTATATGAACCCAGCCATTGTGGCTCCCGATGGCTTTGAC
ATCATTGACATGACAGCCGGAGGTCAGATCAACTCCAACCAAAGGAGAAACTTGGGATCTGTGGCAAAGG
TTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGAGAATGAGCATTTGTCATCAATGAACAATTA
TTTGTCAGAGACCTACCAGGAATTCAGGAAATATTTTCAAGAAGCGTGTGATGTCCCTGAACCGGAAGAG
AAGTTTAATATGGACAAATACACGGATTTGGTGACCGTCAGCAAGCCAGTTATTTATATCTCCATAGAAG
AAATCATCAATACACATTTACTCCTGCTGGAACATCAGGATGCCATTGCCACTGAAAAGAGTGACCTACT
GAACGAGCTGCTGGAGTCTCTGGGGGAGGTGCCCACGGTGGAGTCCTTTCTCGGGGAAGGAGCAGTTGAC
CCCAATGACCCTAACAAGGAAAACACATTAAATCAACTCTCCAAAACCGAGATTTCCCTTTCCTTGACAA
GCAAGTATGACGTCAAAGATGGCGAGGCCGTCGATGGCAGAAGCCTCATGATAAAGACCAAAAAGCTGAT
CATCGATGTGACCCGGAACCAGCCAGGGAGCACGCTGACTGAAATCTTAGAGACCCCAGCAACTGGGCAG
CAGGAACTAGAGCACGCCAAAGACATGGAGAGCCGTGCCGTTGTAGACTCCAGGACCCCGGAGGAAGGGA
AGCAGAGCCAAGCAGTGATAGAAGATGCACGCCTGCCCCTCGAGCAAAAGAAGAGGAAGATTCAGAGGAA
CCTGCGGACGCTGGAGCAGACTGGACACGTGTCCTCCAAAAACAAGTACCAAGACATTCTCAACGAGATT
GCCAAGGATATTCGAAATCAAAGAATCCACCGCAAGCTTCGAAAAGCTGAGCTGTCGAAACTTCAGCAAA
CCCTGAACGCACTTAATAAGAAGGCAGCGTTTTATGAAGATCAAATTAATTATTACGACACCTACATCAA
GACCTGTGTAGACAACCTGAAAAGAAAAAATTCTCGGAGATCAATTAAACTGGATGGAAAAGCAGAACCC
AAAGGAACGAAGAGAGTGAAGCCAGTGAGGTACACGGCAGCAAAGCTACATGACAAAGGCGTCCTGTTGG
GCATAGATGACCTTCAAACCAACCAGTTTAAGAATGTTATGTTCGATATCATAGCTACTGAGGACATGGG
CATCTTTGACGTCAGATCCAAATTCCTCGGTGTTGAGATGGAAAAGGTACAACTCAATATTCAGGACTTA
CTTCAGATGCAGTATGAAGGGGTGGCCGTGATGAAAATGTTCGACAAGGTGAAAGTGAACGTGAACCTTC
TCATATACCTGCTCAACAAGAAGTTCTACGGAAAGTGA

Translation (1575 aa):
MPHEELPSLQRPRYGSIVDDERLSAEEMDERRRQNIAYEYLCHLEEAKRWMEVCLVEELPPTTELEEGLR
NGVYLAKLAKFFAPKMVSEKKIYDVEQTRYKKSGLHFRHTDNTVQWLRAMEAIGLPKIFYPETTDVYDRK
NIPRMIYCIHALSLYLFKLGIAPQIQDLLGKVDFTEEEISNMRKELEKYGIQMPAFSKIGGILANELSVD
EAALHAAVIAINEAIEKGVAKQTIITLRNPNAVLTCVDDSLSQEYQKELWEAKKKKEESAKLKNSCISEE
ERDAYEELLTQAEIQSNISTVNRMAAVDHINAVLQEGDPENTLLALKKPEAQLPAVYPFAAVMYQNELFN
LQKQNTSNYLAHEELLIAVEMLSAVALLNQALESSDLVAVQNQLRSPTIGFNNLDEAHVDRYADALLSVK
QEALSQGQDTLSWNEIQNCIDMINNQIQEENDRMVVLGYINEAIDAGNPLKTLDTLLLPTANIRDVDPDC
AQHYQDVLFYTKSQKLGDPKNVSKVLWLDEIQQAINEANVDENRAKQWVTLVVDVNECLDRKQSDHILTA
LKSSPSNIHNILPECANKYYDTLVKAKESKTDNESSEGSWVTLNVQEKYNYYYNTDSKEGSWVPPELCLS
KESWLTGEEIEDIVEEVTSDYIREKLWSASEDLLVRFEATTLGPALREEFEARKAFLYEQTESVVKIQAF
WKGFKQRQEYLHRQQVFAGNVDSVVKIQSWFRMVTARKSYLSRLRYFEDHKNEIVKIQSLLRASKARDDY
KALVGSENPPLTVIRKFVYLLDQSDLDFQEELEVARLREEVVTKIRANQQLEKDLNLMDIKIGLLVKNRI
TLEDVISHRKKLNKKKGGEIEILNNTDNKGIKSLSKERRKTLETYQQLFYLLQTKPSYLAKLIFQMPQNK
STKFMDTVIFTLYNYASNQREEYLLLKLFKTALEEEIKSKVDQVQDIVTGNPTVIKMVVSFNRGARGQNT
LRQLLAPVVKEIIEDKALVINTNPVEVYKAWVNQLETQTGEASKLPYDVTTEQALTYPEVKNKLEASIEN
LRKVTDKVLGSIISSLDLLPYGLRYIAKVLKNSIREKFPDATEEELLKIVGNLLYYRYMNPAIVAPDGFD
IIDMTAGGQINSNQRRNLGSVAKVLQHAASNKLFEGENEHLSSMNNYLSETYQEFRKYFQEACDVPEPEE
KFNMDKYTDLVTVSKPVIYISIEEIINTHLLLLEHQDAIATEKSDLLNELLESLGEVPTVESFLGEGAVD
PNDPNKENTLNQLSKTEISLSLTSKYDVKDGEAVDGRSLMIKTKKLIIDVTRNQPGSTLTEILETPATGQ
QELEHAKDMESRAVVDSRTPEEGKQSQAVIEDARLPLEQKKRKIQRNLRTLEQTGHVSSKNKYQDILNEI
AKDIRNQRIHRKLRKAELSKLQQTLNALNKKAAFYEDQINYYDTYIKTCVDNLKRKNSRRSIKLDGKAEP
KGTKRVKPVRYTAAKLHDKGVLLGIDDLQTNQFKNVMFDIIATEDMGIFDVRSKFLGVEMEKVQLNIQDL
LQMQYEGVAVMKMFDKVKVNVNLLIYLLNKKFYGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH