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Report for CCDS56623.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56623.1 Public Mus musculus 1 Tmem70 23 108 98 CCDS HistoryNCBI Gene:70397Re-query CCDS DB by CCDS ID:56623.1Re-query CCDS DB by GeneID:70397See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56623.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065373.5 ENSMUSP00000070497.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065373.5Link to Ensembl Protein Viewer:ENSMUSP00000070497.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000065373Re-query CCDS DB by Protein ID:ENSMUSP00000070497
Original member Current member NCBI NM_027415.2 NP_081691.2 Accepted alive Link to Nucleotide Sequence:NM_027415.2Link to Protein Sequence:NP_081691.2Re-query CCDS DB by Nucleotide ID:NM_027415Re-query CCDS DB by Protein ID:NP_081691Link to BLAST:NP_081691.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081691.2 253 Q921N7 253 100% 0 0

Chromosomal Locations for CCDS 56623.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 16665308 16665505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16667668 16667773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16676968 16677425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (762 nt):
ATGCTGTTGGGGTTGGGCGGCCGGTGGGCAGCGGGCCTATGGCCGGGCCGGACGAGGACGACGTGGTGTG
TGGCCGCCGCGCTCCGAGGTTCCGGGATCGCTTTCTGGCGTGCGGCCTCGCTAGCCGAGCCAGAGCGGCT
CCGGAGCGGCGGGCATCTAGCGCTAGCCGAGTCTTGCGGGCCACCCGGGCGAGCGCAGATACCTGTTTGT
TGGGAACAATGTGTCCGCTGCTTCCATACACAAGTTGATAAGCCAGAAAATGGCAGGCTGATTTATACTG
GAAACCTGGCCCGAACGATATTTGGTGTGAAATGTTTCTCTTATTCTACAAGTGTTGTCAGCCTTGCATT
CTTGCCGTACCTTCTCTCACAAAATAACATGATGTTTGGAAGTCTGCCTTTGCAAGTCTTATTTTACGGA
GTCATGGGAAGCTTCACAGTGATCACTCCCACGCTGCTTCACCTTCTTACAAAAGGCTATGTCATTCGGT
TGTATCATGAAGCCACAAGTGACACTTACAGAGCTGTCACTTACAATGTTATGCTTTCGGAAACCAGCAC
AGTGTTTCACCAAGACGACGTGACAATTCCAGAGAGCGCACATATATTCACCAGCTTTTATGCTAAAACA
AAATCGCTATTAGTTAATCCAGCACTCTTTTTAAACCCTGAAGACTATAACCATCTAATGGGTTATGACA
AACCGTTCACTTTTGATATGGAAGAAGTCGATGAAAAGAAACTGCATGAGGGTGAAAAATGA

Translation (253 aa):
MLLGLGGRWAAGLWPGRTRTTWCVAAALRGSGIAFWRAASLAEPERLRSGGHLALAESCGPPGRAQIPVC
WEQCVRCFHTQVDKPENGRLIYTGNLARTIFGVKCFSYSTSVVSLAFLPYLLSQNNMMFGSLPLQVLFYG
VMGSFTVITPTLLHLLTKGYVIRLYHEATSDTYRAVTYNVMLSETSTVFHQDDVTIPESAHIFTSFYAKT
KSLLVNPALFLNPEDYNHLMGYDKPFTFDMEEVDEKKLHEGEK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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