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Report for CCDS73030.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73030.1 Public Homo sapiens 1 RPS6KC1 24 110 108 CCDS HistoryNCBI Gene:26750Re-query CCDS DB by CCDS ID:73030.1Re-query CCDS DB by GeneID:26750See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73030.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000615329.4 ENSP00000484471.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615329.4Link to Ensembl Protein Viewer:ENSP00000484471.1Re-query CCDS DB by Nucleotide ID:ENST00000615329Re-query CCDS DB by Protein ID:ENSP00000484471
Original member Current member NCBI NM_001287220.3 NP_001274149.1 Accepted alive Link to Nucleotide Sequence:NM_001287220.3Link to Protein Sequence:NP_001274149.1Re-query CCDS DB by Nucleotide ID:NM_001287220Re-query CCDS DB by Protein ID:NP_001274149Link to BLAST:NP_001274149.1
Original member Current member NCBI NM_001349663.2 NP_001336592.1 Accepted alive Link to Nucleotide Sequence:NM_001349663.2Link to Protein Sequence:NP_001336592.1Re-query CCDS DB by Nucleotide ID:NM_001349663Re-query CCDS DB by Protein ID:NP_001336592Link to BLAST:NP_001336592.1
Original member Current member NCBI NM_001349664.2 NP_001336593.1 Accepted alive Link to Nucleotide Sequence:NM_001349664.2Link to Protein Sequence:NP_001336593.1Re-query CCDS DB by Nucleotide ID:NM_001349664Re-query CCDS DB by Protein ID:NP_001336593Link to BLAST:NP_001336593.1
Original member Current member NCBI NM_001349665.2 NP_001336594.1 Accepted alive Link to Nucleotide Sequence:NM_001349665.2Link to Protein Sequence:NP_001336594.1Re-query CCDS DB by Nucleotide ID:NM_001349665Re-query CCDS DB by Protein ID:NP_001336594Link to BLAST:NP_001336594.1
Original member Current member NCBI NM_001349666.2 NP_001336595.1 Accepted alive Link to Nucleotide Sequence:NM_001349666.2Link to Protein Sequence:NP_001336595.1Re-query CCDS DB by Nucleotide ID:NM_001349666Re-query CCDS DB by Protein ID:NP_001336595Link to BLAST:NP_001336595.1
Original member Current member NCBI NM_001349667.2 NP_001336596.1 Accepted alive Link to Nucleotide Sequence:NM_001349667.2Link to Protein Sequence:NP_001336596.1Re-query CCDS DB by Nucleotide ID:NM_001349667Re-query CCDS DB by Protein ID:NP_001336596Link to BLAST:NP_001336596.1
Original member Current member NCBI NM_001349668.2 NP_001336597.1 Accepted alive Link to Nucleotide Sequence:NM_001349668.2Link to Protein Sequence:NP_001336597.1Re-query CCDS DB by Nucleotide ID:NM_001349668Re-query CCDS DB by Protein ID:NP_001336597Link to BLAST:NP_001336597.1
Original member Current member NCBI NM_001349669.2 NP_001336598.1 Accepted alive Link to Nucleotide Sequence:NM_001349669.2Link to Protein Sequence:NP_001336598.1Re-query CCDS DB by Nucleotide ID:NM_001349669Re-query CCDS DB by Protein ID:NP_001336598Link to BLAST:NP_001336598.1
Original member Current member NCBI NM_001349670.2 NP_001336599.1 Accepted alive Link to Nucleotide Sequence:NM_001349670.2Link to Protein Sequence:NP_001336599.1Re-query CCDS DB by Nucleotide ID:NM_001349670Re-query CCDS DB by Protein ID:NP_001336599Link to BLAST:NP_001336599.1
Original member Current member NCBI NM_001349671.2 NP_001336600.1 Accepted alive Link to Nucleotide Sequence:NM_001349671.2Link to Protein Sequence:NP_001336600.1Re-query CCDS DB by Nucleotide ID:NM_001349671Re-query CCDS DB by Protein ID:NP_001336600Link to BLAST:NP_001336600.1

Chromosomal Locations for CCDS 73030.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 213240872 213242297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 213242569 213242658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 213261558 213261640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 213262721 213262816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 213272524 213272634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1806 nt):
ATGCTTAAAGCTCTGCCTTTGAAGAGTAGTCTTACTCCAAGTTCTCAAGATGACAGCAACCAGGAAGATG
ATGGCCAAGATAGCTCTCCAAAGTGGCCAGATTCTGGTTCAAGTTCAGAAGAAGAATGTACTACTAGTTA
TTTAACATTATGCAATGAATATGGGCAAGAAAAGATTGAACCAGGGTCTTTGAATGAGGAGCCCTTCATG
AAGACTGAAGGGAATGGTGTTGATACAAAAGCTATTAAAAGCTTCCCAGCACACCTTGCTGCTGACAGTG
ACAGCCCCAGCACACAGCTGAGAGCTCACGAGCTGAAGTTCTTCCCCAACGATGACCCAGAAGCAGTTAG
TTCTCCAAGAACATCAGATTCCCTCAGTAGATCAAAAAATAGCCCCATGGAATTCTTTAGGATAGACAGT
AAGGATAGCGCAAGTGAACTCCTGGGACTTGACTTTGGAGAAAAATTGTATAGTCTAAAATCAGAACCTT
TGAAACCATTCTTTACTCTTCCAGATGGAGACAGTGCTTCTAGGAGTTTTAATACTAGTGAAAGCAAGGT
AGAGTTTAAAGCTCAGGACACCATTAGCAGGGGCTCAGATGACTCAGTGCCAGTTATTTCATTTAAAGAT
GCTGCTTTTGATGATGTCAGTGGTACTGATGAAGGAAGACCTGATCTTCTTGTAAATTTACCTGGTGAAT
TGGAGTCAACAAGAGAAGCTGCAGCAATGGGACCTACTAAGTTTACACAAACTAATATAGGGATAATAGA
AAATAAACTCTTGGAAGCCCCTGATGTTTTATGCCTCAGGCTTAGTACTGAACAATGCCAAGCACATGAG
GAGAAAGGCATAGAGGAACTGAGTGATCCCTCTGGGCCCAAATCCTATAGTATAACAGAGAAACACTATG
CACAGGAGGATCCCAGGATGTTATTTGTAGCAGCTGTTGATCATAGTAGTTCAGGAGATATGTCTTTGTT
ACCCAGCTCAGATCCTAAGTTTCAAGGACTTGGAGTGGTTGAGTCAGCAGTAACTGCAAACAACACAGAA
GAAAGCTTATTCCGTATTTGTAGTCCACTCTCAGGTGCTAATGAATATATTGCAAGCACAGACACTTTAA
AAACAGAAGAAGTATTGCTGTTTACAGATCAGACTGATGATTTGGCTAAAGAGGAACCAACTTCTTTATT
CCAGAGAGACTCTGAGACTAAGGGTGAAAGTGGTTTAGTGCTAGAAGGAGACAAGGAAATACATCAGATT
TTTGAGGACCTTGATAAAAAATTAGCACTAGCCTCCAGGTTTTACATCCCAGAGGGCTGCATTCAAAGAT
GGGCAGCTGAAATGGTGGTAGCCCTTGATGCTTTACATAGAGAGGGAATTGTGTGCCGCGATTTGAACCC
AAACAACATCTTATTGAATGATAGAGGACACATTCAGCTAACGTATTTTAGCAGGTGGAGTGAGGTTGAA
GATTCCTGTGACAGCGATGCCATAGAGAGAATGTACTGTGCCCCAGAGGTTGGAGCAATCACTGAAGAAA
CTGAAGCCTGTGATTGGTGGAGTTTGGGTGCTGTCCTCTTTGAACTTCTCACTGGCAAGACTCTGGTTGA
ATGCCATCCAGCAGGAATAAATACTCACACTACTTTGAACATGCCAGAATGTGTCTCTGAAGAGGCTCGC
TCACTCATTCAACAGCTCTTGCAGTTCAATCCTCTGGAACGACTTGGTGCTGGAGTTGCTGGTGTTGAAG
ATATCAAATCTCATCCATTTTTTACCCCTGTGGATTGGGCAGAACTGATGAGATGA

Translation (601 aa):
MLKALPLKSSLTPSSQDDSNQEDDGQDSSPKWPDSGSSSEEECTTSYLTLCNEYGQEKIEPGSLNEEPFM
KTEGNGVDTKAIKSFPAHLAADSDSPSTQLRAHELKFFPNDDPEAVSSPRTSDSLSRSKNSPMEFFRIDS
KDSASELLGLDFGEKLYSLKSEPLKPFFTLPDGDSASRSFNTSESKVEFKAQDTISRGSDDSVPVISFKD
AAFDDVSGTDEGRPDLLVNLPGELESTREAAAMGPTKFTQTNIGIIENKLLEAPDVLCLRLSTEQCQAHE
EKGIEELSDPSGPKSYSITEKHYAQEDPRMLFVAAVDHSSSGDMSLLPSSDPKFQGLGVVESAVTANNTE
ESLFRICSPLSGANEYIASTDTLKTEEVLLFTDQTDDLAKEEPTSLFQRDSETKGESGLVLEGDKEIHQI
FEDLDKKLALASRFYIPEGCIQRWAAEMVVALDALHREGIVCRDLNPNNILLNDRGHIQLTYFSRWSEVE
DSCDSDAIERMYCAPEVGAITEETEACDWWSLGAVLFELLTGKTLVECHPAGINTHTTLNMPECVSEEAR
SLIQQLLQFNPLERLGAGVAGVEDIKSHPFFTPVDWAELMR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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