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Report for CCDS32800.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32800.1 Public Homo sapiens 18 ESCO1 24 110 108 CCDS HistoryNCBI Gene:114799Re-query CCDS DB by CCDS ID:32800.1Re-query CCDS DB by GeneID:114799See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32800.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000269214.10 ENSP00000269214.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000269214.10Link to Ensembl Protein Viewer:ENSP00000269214.4Re-query CCDS DB by Nucleotide ID:ENST00000269214Re-query CCDS DB by Protein ID:ENSP00000269214
Original member Current member NCBI NM_052911.3 NP_443143.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052911.3Link to Protein Sequence:NP_443143.2Re-query CCDS DB by Nucleotide ID:NM_052911Re-query CCDS DB by Protein ID:NP_443143Link to BLAST:NP_443143.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443143.2 840 Q5FWF5-1 840 100% 0 0

Chromosomal Locations for CCDS 32800.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 21530343 21530490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21532473 21532660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21536042 21536185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21539920 21540009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21560859 21560990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21564203 21564317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21566146 21566206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21567980 21568094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21573314 21574843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2523 nt):
ATGATGTCCATTCAGGAGAAATCAAAAGAGAATTCCTCCAAAGTTACTAAAAAAAGTGACGATAAGAATT
CAGAAACAGAAATTCAGGATTCTCAAAAGAATCTAGCAAAAAAATCAGGTCCAAAGGAGACTATAAAATC
ACAGGCTAAATCTTCCAGTGAAAGTAAAATAAATCAGCCAGAATTGGAAACACGCATGAGTACAAGGTCA
TCAAAGGCAGCATCTAATGATAAAGCTACTAAATCCATTAATAAAAATACGGTGACTGTGAGGGGATATT
CACAAGAATCTACAAAAAAGAAATTATCTCAGAAAAAATTAGTACATGAAAACCCTAAAGCAAATGAACA
GCTTAACCGGAGATCACAAAGGCTACAACAATTAACAGAGGTTTCAAGAAGGTCGTTACGCAGTAGAGAA
ATTCAGGGTCAAGTTCAAGCAGTTAAACAGAGTTTGCCACCAACTAAAAAAGAGCAGTGTAGCAGTACTC
AGAGTAAATCTAATAAAACAAGTCAAAAACATGTGAAGAGAAAAGTACTGGAAGTAAAGTCTGACTCTAA
AGAAGATGAAAATCTAGTAATTAATGAAGTAATAAATTCTCCCAAAGGGAAAAAACGCAAGGTAGAACAT
CAGACAGCTTGTGCTTGTAGTTCTCAATGCACGCAAGGATCTGAAAAGTGTCCTCAGAAGACTACTAGAA
GAGACGAAACGAAACCTGTGCCTGTAACTTCTGAGGTGAAAAGATCAAAAATGGCTACTTCAGTGGTCCC
GAAAAAGAATGAGATGAAGAAGTCGGTTCATACACAAGTGAATACTAACACAACACTCCCAAAAAGTCCA
CAGCCATCAGTGCCTGAACAAAGTGATAATGAGCTGGAGCAAGCAGGAAAGAGCAAACGAGGTAGTATTC
TCCAGCTCTGTGAAGAAATTGCTGGTGAAATTGAGTCAGATAATGTAGAGGTAAAAAAGGAATCTTCACA
AATGGAAAGTGTAAAGGAAGAAAAGCCCACAGAAATAAAATTGGAAGAGACCAGTGTTGAAAGACAAATA
CTTCATCAGAAGGAAACAAATCAGGATGTGCAATGTAATCGTTTTTTCCCAAGTAGAAAAACAAAGCCTG
TGAAATGTATACTAAATGGAATAAACAGCTCAGCCAAGAAGAACTCCAACTGGACTAAAATTAAACTCTC
AAAATTTAACTCTGTGCAGCACAATAAGTTGGACTCTCAAGTTTCCCCTAAATTAGGCTTATTACGAACC
AGTTTTTCACCACCAGCTTTAGAAATGCATCATCCAGTGACTCAAAGTACGTTTTTAGGGACAAAGCTAC
ATGATAGAAATATAACTTGCCAGCAGGAAAAAATGAAAGAAATTAATTCTGAAGAAGTGAAAATTAATGA
TATTACAGTAGAAATTAATAAAACCACAGAAAGGGCTCCTGAAAATTGTCATTTGGCCAATGAGATAAAA
CCTTCTGACCCACCATTGGATAATCAGATGAAACATTCTTTTGATTCAGCATCAAATAAGAATTTCAGCC
AATGTTTGGAATCCAAGCTAGAAAACAGTCCAGTGGAAAATGTTACTGCTGCTTCGACTCTGCTCAGTCA
AGCAAAAATTGATACAGGAGAGAATAAATTTCCAGGTTCAGCTCCCCAACAGCATAGTATTCTCAGTAAC
CAGACATCTAAAAGCAGTGATAACAGGGAGACACCACGAAATCATTCTTTGCCTAAGTGTAATTCCCATT
TGGAGATAACAATTCCAAAGGACTTGAAACTAAAAGAAGCAGAGAAAACTGATGAAAAACAGTTGATTAT
AGATGCAGGACAAAAAAGATTTGGAGCAGTTTCTTGTAATGTTTGTGGAATGCTGTATACAGCTTCAAAT
CCAGAAGATGAAACACAGCATCTGCTTTTCCACAACCAGTTTATAAGTGCTGTTAAATATGTGGGCTGGA
AGAAAGAAAGAATTCTGGCTGAATACCCTGATGGCAGGATAATAATGGTTCTTCCTGAAGACCCAAAGTA
TGCCCTGAAAAAGGTTGACGAGATTAGAGAGATGGTTGACAATGATTTAGGTTTTCAACAGGCTCCACTA
ATGTGCTATTCCAGAACTAAAACACTTCTCTTCATTTCCAATGACAAAAAAGTAGTTGGCTGCCTAATTG
CGGAACATATCCAATGGGGCTACAGAGTTATAGAAGAGAAACTTCCAGTTATCAGGTCAGAAGAAGAAAA
AGTCAGATTTGAAAGGCAAAAAGCCTGGTGCTGCTCAACATTACCAGAGCCTGCAATCTGCGGGATCAGT
CGAATATGGGTATTCAGCATGATGCGTCGGAAGAAAATTGCTTCTCGCATGATTGAATGCCTAAGGAGTA
ACTTTATATATGGCTCATATTTGAGCAAAGAAGAAATTGCTTTCTCAGATCCCACTCCTGATGGAAAGCT
GTTTGCAACACAGTACTGTGGCACTGGTCAATTTCTGGTATATAATTTTATTAATGGACAGAATAGCACG
TAA

Translation (840 aa):
MMSIQEKSKENSSKVTKKSDDKNSETEIQDSQKNLAKKSGPKETIKSQAKSSSESKINQPELETRMSTRS
SKAASNDKATKSINKNTVTVRGYSQESTKKKLSQKKLVHENPKANEQLNRRSQRLQQLTEVSRRSLRSRE
IQGQVQAVKQSLPPTKKEQCSSTQSKSNKTSQKHVKRKVLEVKSDSKEDENLVINEVINSPKGKKRKVEH
QTACACSSQCTQGSEKCPQKTTRRDETKPVPVTSEVKRSKMATSVVPKKNEMKKSVHTQVNTNTTLPKSP
QPSVPEQSDNELEQAGKSKRGSILQLCEEIAGEIESDNVEVKKESSQMESVKEEKPTEIKLEETSVERQI
LHQKETNQDVQCNRFFPSRKTKPVKCILNGINSSAKKNSNWTKIKLSKFNSVQHNKLDSQVSPKLGLLRT
SFSPPALEMHHPVTQSTFLGTKLHDRNITCQQEKMKEINSEEVKINDITVEINKTTERAPENCHLANEIK
PSDPPLDNQMKHSFDSASNKNFSQCLESKLENSPVENVTAASTLLSQAKIDTGENKFPGSAPQQHSILSN
QTSKSSDNRETPRNHSLPKCNSHLEITIPKDLKLKEAEKTDEKQLIIDAGQKRFGAVSCNVCGMLYTASN
PEDETQHLLFHNQFISAVKYVGWKKERILAEYPDGRIIMVLPEDPKYALKKVDEIREMVDNDLGFQQAPL
MCYSRTKTLLFISNDKKVVGCLIAEHIQWGYRVIEEKLPVIRSEEEKVRFERQKAWCCSTLPEPAICGIS
RIWVFSMMRRKKIASRMIECLRSNFIYGSYLSKEEIAFSDPTPDGKLFATQYCGTGQFLVYNFINGQNST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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