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Report for CCDS30744.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
30744.1 |
Public |
Homo sapiens |
1 |
SGIP1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:84251](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:30744.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:84251](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 30744.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000371037.9 |
ENSP00000360076.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000371037.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000360076.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000371037](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000360076](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001376534.1 |
NP_001363463.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001376534.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001363463.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001376534](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001363463](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001363463.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001376535.1 |
NP_001363464.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001376535.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001363464.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001376535](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001363464](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001363464.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_032291.4 |
NP_115667.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_032291.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_115667.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_032291](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_115667](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_115667.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 30744.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2487 nt): ATGATGGAAGGATTGAAAAAACGTACAAGGAAGGCCTTTGGAATACGGAAGAAAGAAAAGGACACTGATT CTACAGGTTCACCAGATAGAGATGGAATTCAGCCCAGCCCACACGAACCACCCTACAATAGCAAAGCAGA GTGTGCGCGTGAAGGAGGAAAAAAAGTTTCGAAGAAAAGCAATGGGGCACCAAATGGATTTTATGCGGAA ATTGATTGGGAAAGATATAACTCACCTGAGCTGGATGAAGAAGGCTACAGCATCAGACCCGAGGAACCCG GCTCTACCAAAGGAAAGCACTTTTATTCTTCAAGTGAATCGGAAGAAGAAGAAGAATCACATAAGAAATT TAATATCAAGATTAAACCATTGCAATCTAAAGACATTCTTAAGAATGCTGCAACTGTAGATGAATTGAAG GCATCAATAGGCAACATCGCACTTTCCCCATCACCAGTGAGGAAAAGTCCGAGGCGCAGCCCGGGTGCAA TTAAAAGGAACTTATCCAGTGAAGAAGTGGCAAGACCCAGGCGTTCCACACCAACTCCAGAACTTATAAG CAAAAAGCCTCCAGATGACACTACGGCCCTTGCTCCTCTCTTTGGCCCACCACTAGAATCAGCTTTTGAT GAACAGAAGACAGAAGTTCTTTTAGATCAGCCTGAGATATGGGGTTCAGGCCAACCAATTAATCCAAGCA TGGAGTCGCCAAAGTTAACAAGGCCTTTTCCCACTGGAACACCTCCACCACTGCCTCCAAAAAATGTACC AGCTACCCCACCCCGAACAGGATCCCCCTTAACAATTGGACCAGGAAATGACCAGTCAGCCACAGAGGTC AAAATTGAAAAACTACCATCCATCAATGACTTGGACAGCATTTTTGGGCCAGTATTGTCCCCCAAGTCTG TTGCTGTTAATGCTGAAGAAAAGTGGGTCCATTTTTCTGATACATCCCCGGAACATGTTACTCCGGAGTT GACTCCAAGGGAAAAAGTGGTGTCCCCACCAGCTACACCAGACAACCCAGCTGACTCCCCAGCTCCAGGC CCTCTCGGCCCCCCAGGTCCCACAGGCCCCCCAGGGCCTCCTGGGCCTCCTCGCAATGTACTATCGCCGC TCAATTTAGAAGAAGTCCAGAAGAAAGTCGCTGAGCAGACCTTCATTAAAGATGATTACTTAGAAACAAT CTCATCTCCTAAAGATTTTGGGTTGGGACAAAGAGCAACTCCACCTCCCCCACCACCACCCACCTACAGG ACTGTGGTTTCGTCCCCCGGACCTGGCTCGGGCCCTGGTCCGGGGACCACCAGTGGTGCATCATCCCCTG CTCGACCAGCCACTCCTTTGGTTCCTTGCAGAAGTACCACTCCACCTCCACCTCCTCCCCGGCCTCCATC CCGGCCAAAGCTACCTCCAGGAAAACCTGGAGTTGGAGATGTGTCCAGACCTTTTAGCCCTCCCATTCAT TCTTCCAGCCCTCCTCCAATAGCACCCTTAGCGCGGGCTGAAAGCACTTCTTCAATATCGTCAACCAATT CCTTGAGCGCAGCCACCACTCCCACAGTTGAGAATGAACAGCCTTCCCTCGTTTGGTTTGACAGAGGAAA GTTTTATTTGACTTTTGAAGGTTCTTCCAGGGGACCCAGCCCCCTAACCATGGGAGCTCAGGACACTCTC CCTGTTGCAGCAGCATTTACAGAAACAGTCAATGCCTATTTCAAAGGAGCAGACCCAAGCAAATGTATCG TTAAGATTACCGGAGAAATGGTGTTGTCATTTCCTGCTGGCATCACCAGACACTTTGCCAACAACCCGTC CCCAGCTGCTCTGACTTTTCGGGTGATAAATTTCAGCAGGTTAGAACACGTCCTGCCAAACCCCCAACTT CTCTGCTGTGATAATACACAAAATGATGCCAATACCAAGGAATTCTGGGTAAACATGCCAAATTTGATGA CTCACCTAAAGAAAGTGTCTGAACAAAAACCCCAGGCTACATATTATAACGTTGACATGCTCAAATATCA GGTGTCTGCCCAGGGCATTCAGTCCACACCTCTGAACCTGGCAGTGAATTGGCGATGTGAGCCTTCAAGC ACTGACCTGCGCATAGATTACAAATATAATACAGATGCAATGACGACTGCTGTGGCCCTCAACAATGTGC AGTTCCTGGTCCCCATCGACGGAGGAGTCACCAAGCTCCAGGCAGTGCTCCCACCAGCAGTCTGGAATGC TGAACAACAGAGAATATTGTGGAAGATTCCTGATATCTCTCAGAAGTCAGAAAATGGAGGGGTGGGTTCT TTGTTGGCAAGATTTCAGTTATCTGAAGGCCCAAGCAAACCTTCTCCATTGGTTGTGCAGTTCACAAGTG AAGGAAGCACCCTTTCTGGCTGTGACATTGAACTTGTTGGAGCAGGGTATCGATTTTCACTCATCAAGAA AAGGTTTGCTGCAGGAAAATACTTGGCAGATAACTAA
Translation (828 aa): MMEGLKKRTRKAFGIRKKEKDTDSTGSPDRDGIQPSPHEPPYNSKAECAREGGKKVSKKSNGAPNGFYAE IDWERYNSPELDEEGYSIRPEEPGSTKGKHFYSSSESEEEEESHKKFNIKIKPLQSKDILKNAATVDELK ASIGNIALSPSPVRKSPRRSPGAIKRNLSSEEVARPRRSTPTPELISKKPPDDTTALAPLFGPPLESAFD EQKTEVLLDQPEIWGSGQPINPSMESPKLTRPFPTGTPPPLPPKNVPATPPRTGSPLTIGPGNDQSATEV KIEKLPSINDLDSIFGPVLSPKSVAVNAEEKWVHFSDTSPEHVTPELTPREKVVSPPATPDNPADSPAPG PLGPPGPTGPPGPPGPPRNVLSPLNLEEVQKKVAEQTFIKDDYLETISSPKDFGLGQRATPPPPPPPTYR TVVSSPGPGSGPGPGTTSGASSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIH SSSPPPIAPLARAESTSSISSTNSLSAATTPTVENEQPSLVWFDRGKFYLTFEGSSRGPSPLTMGAQDTL PVAAAFTETVNAYFKGADPSKCIVKITGEMVLSFPAGITRHFANNPSPAALTFRVINFSRLEHVLPNPQL LCCDNTQNDANTKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVNWRCEPSS TDLRIDYKYNTDAMTTAVALNNVQFLVPIDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGS LLARFQLSEGPSKPSPLVVQFTSEGSTLSGCDIELVGAGYRFSLIKKRFAAGKYLADN
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