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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS40472.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
40472.1 |
Public |
Mus musculus |
8 |
Pkd1l3 |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 40472.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000109242.7 |
ENSMUSP00000104865.1 |
Accepted |
alive |
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NCBI |
NM_001039700.3 |
NP_001034789.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001034789.2 |
2201 |
Q2EG98-1 |
2201 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 40472.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6606 nt): ATGCTCTTGCAGAGGCGGTCCTGGCTCTGGCTGTACATTAGAATCGGTGTCATTCTGGGTGATATTTTGG GACGTAAACCAAGCATCCGGGAGCAACATGGGGGAAACAGCTGCTATCAGCTTAACAGACTTTTCTGTGA CTTCCAGGAAGCAGATAACTACTGCCACGCCCAGAGAGGACGCCTAGCCCACACGTGGAACCCCAAGCTT CGGGGTTTCCTAAAAAGCTTCCTGAATGAAGAAACAGTGTGGTGGGTCAGGGGAAACCTGACGCTGCCCG GATCGCATCCAGGGATAAATCAGACAGGAGGTGATGACGTCTTAAGGAACCAAAAGCCTGGCGAGTGCCC TTCCGTGGTCACACACTCTAATGCTGTCTTCTCAAGATGGAACCTGTGCATAGAGAAGCATCATTTCATT TGCCAGGCTGCCGCCTTTCCCCCTCAAGGTGCAAGCATTTGGAGAAATGAGTTTGGTCCTGGTCCTCTGT TACCCATGAAAAGAAGAGGAGCTGAGACAGAGAGACATATGATCCCAGGAAATGGCCCCCCGTTAGCCAT GTGTCACCAACCCGCTCCTCCTGAGCTTTTTGAGACATTGTGCTTTCCCATTGACCCAGCTTCTTCAGCA CCTCCAAAAGCCACACACAGGATGACAATCACATCCCTAACTGGAAGGCCACAGGTGACATCAGACACAC TTGCATCCAGCAGCCCACCACAGGGGACATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATC AGCCACATCTGCATCTAGCAGCCCACCACAGGGGACATCAGACACACCTGCATCCAGCAGCCCACCACAG GTGACATCAGCCACATCTGCATCTAGCAGCCCACCACAGGGGACATCAGACACACCTGCATCCAGCAGCC CACCACAGGTGACATCAGCCACATCTGCATCTAGCAGCCCACCACAGGGGACATCAGACACACCTGCATC CAGCAGCCCACCACAGGTGACATCAGCCACATCTGCATCTAGCAGCCCACCACAGGGGACATCAGACACA CCTGCATCCAGCAGCCCACCACAGGGGACATTAGACACACCTTCATCTAGCAGCCCACCACAGGGGACAT CAGACACACCTGCATCCAGCAGCCCACCACAGGGGACATCAGAGACACCTGCATCCAACAGCCCACCACA GGGGACATCAGAGACACCTGGATTCAGCAGCCCACCACAGGTGACAACAGCCACACTTGTATCCAGCAGC CCACCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACACAGGTGACATCAGAGACACCTGCAT CCAGCAGCCCAACACAGGTGACATCAGACACACCTGCATCCAATAGCCCACCACAGGGGACATCAGACAC ACCTGGATTCAGCAGCCCAACACAGGTGACAACAGCCACACTTGTATCCAGCAGCCCACCACAGGTGACA TCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGACACACCTGCATCCAGCAGCCCACCAC AGGTGACATCAGAGACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGACACATCTGCATCCATCAG CCCACCACAGGTAATATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGAGACACCTGCA TCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACA CACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCACCATGGCCTGT TATAACAGAGGTCACCAGGCCTGAATCCACAATACCTGCTGGAAGATCTTTGGCAAACATCACTTCAAAG GCACAGGAAGACTCTCCCCTGGGAGTCATCTCTACCCATCCACAGATGTCATTTCAGAGTTCAACCAGTC AGGCCTTGGATGAGACAGCAGGGGAACGGGTCCCAACAATTCCTGATTTCCAAGCCCACAGTGAATTCCA GAAAGCTTGTGCCATCCTCCAGAGACTGAGAGACTTCCTGCCGACTTCTCCCACATCAGCTCAGAAGAAC AACAGTTGGAGCTCTCAAACTCCAGCAGTCAGCTGCCCCTTCCAGCCTCTTGGACGTCTAACAACAACGG AAAAAAGCAGTCATCAGATGGCTCAGCAAGACATGGAACAGCACCCCATGGACGGAGCACACAATGCATT TGGGATCAGTGCAGGGGGATCGGAAATTCAAAGTGACATCCAGCTACGGAGTGAGTTTGAGGTTGAAGAC ATGCTGGAGACATCCCTGATGGCCCTGGGGGAGATCCACAGAGCATTTTGCCAGCAGAGTCTGTGCCCTC AGTCAGCAGTGACCCTGGCCTCTCCCTCTGCTACTCTGATGTTGAGCAGCCAAAATGTGTCAACGTTGCC CCTGAGCACCTACACTTTGGGTGAGCCTGCACCCTTGACTTTGGGCTTCCCGTCAGCAGAAGCTCTGAAG GAGCTCTTGAACAAACACCCAGGCGTGAACCTTCAAGTGACAGGTCTGGCTTTCAACCCTTTTAAGACTT TGGATGACAAGAACATTGTTGGAAGCATTGGAAATGTGCAGCTGAGCTCTGCTTATCAGTCGATCAGAGT CCACGACTTAATAGAAGATATTGAGATCATGCTCTGGAGAAATGCCAGCATGGAGACCCAGCCCACCAGC CTCAACACAAGTACAGACCATTTCACAATCTCTGTGAACATCACTTCCTTGGAGAAGACCCTCATTGTGA CCATCGAGCCTGAAAGTCCCCTCCTAATGACGCTCCACTTGGGCTTCCAGGACCAGCTGGCCCACACTCA CTTCTATCTCAACATCAGCCTGCCAAGGGACCAAGTGTGGCAGAAAGATGAGGAGTACACGTGGGTGCTG ACACCAGAGAACCTGTGGTACGGGACTGGCACCTACTACATAATGGCTGTGGAGAATAAAAGTACAGAGG CGGCACAGCACACACCCGTCCTGGTCTCAGTGGTCACAGCTGTCACCCAGTGCTATTTCTGGGACCGATA CAATAGGACATGGAAGAGCGATGGATGCCAAGTGGGGCCGAAGAGCACCATTTTAAAGACACAGTGTCTC TGTGACCACCTGACCTTCTTCAGCAGCGACTTCTTCATCGTGCCGAGGACGGTGGATGTAGAAAACACCA TCAAACTGCTTCTTCATGTGACCAACAACCCTGTCGGGGTGTCATTGCTGTCCAGCCTCCTAGGATTCTA TATCCTCTTAGCCATGTGGGCTTCCAGAAAGGATCGAGAAGATATGCAGAAGGTGAAGGTAACAGTCCTG GCTGACAATGACCCCAGCTCTGCATCCCACTACCTTATCCAGGTCTACACTGGCTATCGGAGGAGGGCTG CTACCACCGCCAAGGTCGTTATCACTCTCTATGGCTCAGAGGGGCACAGTGAGCCCCACCACCTTTGTGA CCCTGAGAAGACAGTTTTTGAGCGTGGAGCACTGGATGTTTTCCTTCTTTCCACCGGATCCTGGCTGGGG GACCTGCATGGCCTTCGGCTGTGGCATGACAATTCTGGCGACAGCCCTTCTTGGTATGTAAGCCAGGTGA TCGTCAGTGACATGACCACGAGGAAGAAATGGCATTTCCAGTGCAATTGTTGGCTGGCCGTGGACTTGGG CAACTGTGAGCGTGACAGGGTGTTCACACCAGCCTCCAGAAGCGAGCTCTCTTCCTTCAGACACCTGTTC TCCTCCACAATCGTAGAAAAGTTCACCCAGGATTATCTGTGGCTCTCAGTTGCAACTCGACATCCCTGGA ACCAGTTTACACGAGTCCAGAGGCTCTCCTGCTGCATGGCACTACTGCTCTGTGACATGGTCATCAATAT TATGTTCTGGAAGATGGGTGGCACCACTGCCAAGAGGGGCACCGAACAACTAGGTCCACTTGCTGTGACC TTGTCGGAGCTGCTCGTCAGCATCCAGACCTCCATCATCCTCTTCCCCATCCACCTCATCTTTGGGCGGC TCTTCCAGTTGATTCACCCACCAGAAGCTCTGCCCCAGCTTCCTTTCATCCAGGCTGCCTGGCCCCCTGC TCTTGTTTGTGAGTCCCCCTCTCTTACACAGGTGGTCAAGGAATTAAAGGAAACTGTGGGATTCCTGCTC AGGAGAAATACACAGCTGCTCTCGGAGTGTGAGCCGTCTTCGTGCAGTTCTTGTGACATTAACAAGCTGG CGAAGCTTTTATCCGGCCTCATTTACTGTCACTTAGAAGACGAAGGCTGTCACCAGCAGACAGAATCCCA CTGGGAAGACGCAGTGTCTGAAAACCATTACCATTTCTGCCGCTACCTTCTCCAACTTCTGCGGAGACTG AAAGCGCATTTAGAGGCTCTTGGTGCTACCCAGGATCACCAGTCTTGTGATTTCTCAGAAGCAGTCAGCC AACTTCAAAACCTCCAGGAACTCCTGGAGACACAGACTCTCCGCAGAGGGCCAGGGCCATGCAGGCATTC CACCAGTTTCCCCATCCTCAGCCCAGGAGAAGGGAAGAAGCCCATGTCATTTTGCCTGTTCAGATGGTTG AAGTGCAGCTGCTGGCTCCTTCTTGGTGTCATCAGCCTGGCCTCGGCCTTTTTTATAACGCTCTATAGCT TGGAGTTGGACAAAGACCAAGCCACCAGCTGGGTTATTTCAATGATGCTGTCGGTACTACAAGACATCTT TATCAGCCAGCCGATAAAGGTCATCTTCCTGACATTGTTGTTCTCCCTGATGGCAAACCACATGCCGTGG CTTAACAAAGACAAGGAACAACACGCCCGGAGAATCGTAGCACTTTGGGCAAAGTGTCCTTGGTCGGCAC CTGGCTTGAGAGACAAGAACAATCCCATCTACACTGCCCCAGCAATGAACAACCTAGCCAAGCCTACAAG GAAGGCCTGGAAGAAGCAGCTCTCCAAGCTGACGGGTGGTACTCTGGTGCAAATCCTCTTCCTGACCCTG CTGATGACTACCGTCTATTCTGCAAAGGACTCTAGTCGATTTTTCCTCCATCGAGCTATCTGGAAGAGGT TTTCTCACCGTTTCTCAGAAATCAAAACTGTAGAGGATTTCTACCCCTGGGCCAACGGCACCCTCCTTCC TAACCTATATGGGGATTACAGAGGATTTATTACTGACGGGAACTCCTTTCTTCTGGGCAATGTTTTGATC CGCCAGACTCGCATTCCTAATGACATATTCTTCCCAGGATCTCTCCACAAGCAAATGAAGTCGCCTCCCC AACATCAGGAGGACAGAGAGAACTATGGGGCTGGCTGGGTCCCCCCTGACACAAACATCACAAAAGTAGA CAGTATTTGGCATTATCAGAATCAGGAGTCGCTGGGAGGCTATCCCATCCAAGGGGAGCTAGCCACTTAC TCAGGAGGAGGCTATGTTGTGAGGCTTGGAAGAAACCACAGTGCGGCAACCAGGGTTCTGCAGCATCTGG AACAGAGGCGCTGGCTGGACCACTGCACAAAAGCCCTCTTTGTAGAATTCACGGTCTTCAATGCTAATGT GAATCTGCTCTGTGCGGTGACCCTCATCTTGGAATCCAGTGGTGTGGGGACTTTCCTCACCTCCCTGCAA CTGGACAGTTTAACTTCCCTTCAGTCATCAGAGAGGGGCTTCGCCTGGATCGTCTCACAGGTCGTCTACT ACCTTCTCGTCTGTTACTATGCCTTCATCCAGGGCTGTCGGCTGAAGCGGCAGAGGCTGGCGTTCTTCAC TAGGAAAAGGAACCTCCTGGACACAAGCATCGTCCTCATTAGCTTCAGCATCCTGGGCCTCAGCATGCAG AGCCTCTCTCTACTTCACAAAAAGATGCAGCAGTACCACTGTGACCGGGACAGGTTCATCAGTTTCTACG AGGCACTGAGAGTGAACTCTGCAGTCACCCACCTCAGGGGCTTCCTGCTTCTCTTCGCAACTGTGCGGGT CTGGGACCTACTGCGACATCATGCCCAGTTACAGGTCATCAACAAGACACTGTCCAAAGCCTGGGACGAG GTGCTGGGCTTTATACTGATCATCGTGGTCCTGTTAAGCAGCTATGCCATGACTTTCAACCTGCTGTTTG GATGGAGCATCTCTGACTACCAGAGCTTCTTCAGATCTATAGTGACTGTTGTTGGCCTCTTGATGGGAAC TTCAAAGCACAAGGAGGTTATTGCTCTATACCCAATCCTGGGCTCCCTTTTGGTTCTCAGTAGCATCATC TTGATGGGACTTGTGATCATTAATCTTTTTGTTTCTGCCATTCTCATTGCCTTTGGGAAAGAAAGGAAGG CCTGTGAGAAAGAAGCTACACTGACAGATATGTTACTACAAAAGCTCTCAAGTCTGTTAGGAATCCGCCT GCACCAGAATCCATCTGAGGAACACGCTGACAACACTGGTTCCTCAAATCTCCGGGAAAGATCATCAAAG TCTATGTCTTCTGATGCTGAGGTGCTGGCTCCAGCAGATGCAGTTGGAAGTGTGTCTGGCACCGATGGCA ACTCTGGCAGTACAAAGGTGTTGTAA
Translation (2201 aa): MLLQRRSWLWLYIRIGVILGDILGRKPSIREQHGGNSCYQLNRLFCDFQEADNYCHAQRGRLAHTWNPKL RGFLKSFLNEETVWWVRGNLTLPGSHPGINQTGGDDVLRNQKPGECPSVVTHSNAVFSRWNLCIEKHHFI CQAAAFPPQGASIWRNEFGPGPLLPMKRRGAETERHMIPGNGPPLAMCHQPAPPELFETLCFPIDPASSA PPKATHRMTITSLTGRPQVTSDTLASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQ VTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDT PASSSPPQGTLDTPSSSSPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSS PPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDTPGFSSPTQVTTATLVSSSPPQVT SDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQVTSDTSASISPPQVISDTPASSSPPQVTSETPA SSSPTNMTSDTPASSSPTNMTSDTPASSSPTNMTSDTPASSSPPWPVITEVTRPESTIPAGRSLANITSK AQEDSPLGVISTHPQMSFQSSTSQALDETAGERVPTIPDFQAHSEFQKACAILQRLRDFLPTSPTSAQKN NSWSSQTPAVSCPFQPLGRLTTTEKSSHQMAQQDMEQHPMDGAHNAFGISAGGSEIQSDIQLRSEFEVED MLETSLMALGEIHRAFCQQSLCPQSAVTLASPSATLMLSSQNVSTLPLSTYTLGEPAPLTLGFPSAEALK ELLNKHPGVNLQVTGLAFNPFKTLDDKNIVGSIGNVQLSSAYQSIRVHDLIEDIEIMLWRNASMETQPTS LNTSTDHFTISVNITSLEKTLIVTIEPESPLLMTLHLGFQDQLAHTHFYLNISLPRDQVWQKDEEYTWVL TPENLWYGTGTYYIMAVENKSTEAAQHTPVLVSVVTAVTQCYFWDRYNRTWKSDGCQVGPKSTILKTQCL CDHLTFFSSDFFIVPRTVDVENTIKLLLHVTNNPVGVSLLSSLLGFYILLAMWASRKDREDMQKVKVTVL ADNDPSSASHYLIQVYTGYRRRAATTAKVVITLYGSEGHSEPHHLCDPEKTVFERGALDVFLLSTGSWLG DLHGLRLWHDNSGDSPSWYVSQVIVSDMTTRKKWHFQCNCWLAVDLGNCERDRVFTPASRSELSSFRHLF SSTIVEKFTQDYLWLSVATRHPWNQFTRVQRLSCCMALLLCDMVINIMFWKMGGTTAKRGTEQLGPLAVT LSELLVSIQTSIILFPIHLIFGRLFQLIHPPEALPQLPFIQAAWPPALVCESPSLTQVVKELKETVGFLL RRNTQLLSECEPSSCSSCDINKLAKLLSGLIYCHLEDEGCHQQTESHWEDAVSENHYHFCRYLLQLLRRL KAHLEALGATQDHQSCDFSEAVSQLQNLQELLETQTLRRGPGPCRHSTSFPILSPGEGKKPMSFCLFRWL KCSCWLLLGVISLASAFFITLYSLELDKDQATSWVISMMLSVLQDIFISQPIKVIFLTLLFSLMANHMPW LNKDKEQHARRIVALWAKCPWSAPGLRDKNNPIYTAPAMNNLAKPTRKAWKKQLSKLTGGTLVQILFLTL LMTTVYSAKDSSRFFLHRAIWKRFSHRFSEIKTVEDFYPWANGTLLPNLYGDYRGFITDGNSFLLGNVLI RQTRIPNDIFFPGSLHKQMKSPPQHQEDRENYGAGWVPPDTNITKVDSIWHYQNQESLGGYPIQGELATY SGGGYVVRLGRNHSAATRVLQHLEQRRWLDHCTKALFVEFTVFNANVNLLCAVTLILESSGVGTFLTSLQ LDSLTSLQSSERGFAWIVSQVVYYLLVCYYAFIQGCRLKRQRLAFFTRKRNLLDTSIVLISFSILGLSMQ SLSLLHKKMQQYHCDRDRFISFYEALRVNSAVTHLRGFLLLFATVRVWDLLRHHAQLQVINKTLSKAWDE VLGFILIIVVLLSSYAMTFNLLFGWSISDYQSFFRSIVTVVGLLMGTSKHKEVIALYPILGSLLVLSSII LMGLVIINLFVSAILIAFGKERKACEKEATLTDMLLQKLSSLLGIRLHQNPSEEHADNTGSSNLRERSSK SMSSDAEVLAPADAVGSVSGTDGNSGSTKVL
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