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Report for CCDS33642.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33642.1 Public Homo sapiens 22 ELFN2 24 110 108 CCDS HistoryNCBI Gene:114794Re-query CCDS DB by CCDS ID:33642.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33642.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000402918.7 ENSP00000385277.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000402918.7Link to Ensembl Protein Viewer:ENSP00000385277.1Re-query CCDS DB by Nucleotide ID:ENST00000402918Re-query CCDS DB by Protein ID:ENSP00000385277
Original member Current member NCBI NM_052906.5 NP_443138.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052906.5Link to Protein Sequence:NP_443138.2Re-query CCDS DB by Nucleotide ID:NM_052906Re-query CCDS DB by Protein ID:NP_443138Link to BLAST:NP_443138.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443138.2 820 Q5R3F8 820 100% 0 0

Chromosomal Locations for CCDS 33642.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 37373072 37375534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2463 nt):
ATGCTGCGCCTGGGGCTGTGCGCGGCGGCGCTGCTGTGCGTGTGCCGGCCGGGTGCCGTGCGTGCCGACT
GC
TGGCTCATTGAGGGCGACAAGGGCTACGTGTGGCTGGCCATCTGCAGCCAGAACCAGCCGCCCTACGA
G
ACCATCCCGCAGCACATCAATAGCACCGTGCACGACCTGCGGCTCAACGAGAACAAGCTCAAAGCCGTG
CTC
TACTCCTCGCTCAACCGCTTTGGGAACCTCACCGACCTCAACCTCACCAAGAACGAGATCTCCTACA
TC
GAGGACGGTGCCTTCCTGGGCCAGTCGAGCCTGCAGGTCCTGCAGCTGGGCTACAACAAGCTCAGCAA
C
CTGACGGAGGGCATGCTGCGAGGCATGAGCCGCCTGCAGTTCCTCTTTGTCCAGCACAACCTCATCGAG
GTG
GTGACGCCCACCGCCTTCTCCGAGTGCCCGAGCCTCATCAGCATCGACCTGTCCTCCAACCGCCTCA
GC
CGCCTGGACGGTGCCACCTTTGCCAGCCTCGCCAGCCTGATGGTGTGTGAGCTGGCCGGCAACCCCTT
C
AACTGTGAGTGCGACCTCTTCGGCTTCCTGGCCTGGCTGGTGGTCTTCAACAACGTCACCAAGAACTAC
GAC
CGCCTGCAGTGTGAGTCGCCGCGGGAGTTTGCCGGCTACCCGCTGCTGGTGCCCCGGCCCTACCACA
GC
CTCAACGCCATCACCGTACTCCAGGCCAAGTGTCGGAATGGCTCGCTGCCCGCCCGGCCCGTGAGCCA
C
CCCACGCCCTACTCCACCGACGCCCAGAGGGAGCCAGACGAGAACTCGGGCTTCAACCCCGACGAGATC
CTT
TCGGTGGAGCCGCCGGCCTCGTCCACCACGGATGCGTCGGCAGGGCCAGCCATCAAGCTGCACCACG
TC
ACGTTCACCTCGGCCACCCTGGTGGTCATCATCCCACACCCCTACAGCAAGATGTACATCCTCGTGCA
G
TACAACAACAGCTACTTCTCCGACGTCATGACCCTCAAGAACAAGAAGGAGATCGTGACGCTGGACAAA
CTG
CGGGCGCACACTGAGTACACCTTCTGCGTGACCTCGCTGCGCAACAGCCGCCGCTTCAACCACACCT
GC
CTGACCTTCACCACGCGGGACCCCGTCCCCGGAGACTTGGCGCCCAGCACCTCCACCACCACCCACTA
C
ATCATGACCATCCTGGGCTGCCTCTTTGGCATGGTTATCGTGCTGGGAGCCGTGTACTACTGCCTGCGC
AAG
CGGCGCATGCAGGAGGAGAAGCAGAAGTCTGTCAACGTCAAGAAGACCATCCTGGAGATGCGCTACG
GG
GCTGATGTGGATGCCGGCTCCATTGTGCACGCCGCCCAGAAGCTGGGCGAGCCTCCCGTGCTGCCCGT
A
TCTCGCATGGCCTCCATCCCCTCCATGATCGGGGAGAAGCTGCCCACCGCCAAGGGGTTGGAGGCCGGG
CTG
GACACACCCAAGGTAGCCACCAAAGGCAACTATATCGAGGTGCGCACAGGCGCCGGCGGGGACGGTC
TG
GCTCGGCCCGAGGATGACCTCCCGGACCTCGAGAACGGCCAGGGCTCGGCTGCAGAGATCTCCACCAT
T
GCCAAGGAGGTGGACAAGGTCAACCAGATCATTAACAACTGCATCGATGCTCTCAAGCTGGACTCGGCC
TCT
TTTCTGGGAGGCGGCAGCAGCAGTGGGGACCCCGAGCTGGCCTTCGAGTGCCAGTCCCTCCCTGCAG
CT
GCTGCCGCCTCCTCAGCCACTGGCCCCGGGGCCCTGGAGCGGCCCAGCTTCCTTTCGCCTCCCTACAA
G
GAGAGCTCCCACCACCCACTACAGCGCCAGCTGAGCGCCGACGCGGCCGTGACCCGCAAGACCTGCAGC
GTG
TCGTCCAGTGGTTCCATCAAGAGCGCCAAGGTCTTTAGCCTGGACGTGCCCGACCATCCGGCCGCCA
CA
GGGCTGGCTAAGGGCGACTCCAAGTACATCGAGAAGGGCAGCCCCCTCAACAGCCCGCTGGACCGGCT
C
CCGCTGGTGCCGGCGGGCAGCGGCGGGGGCAGCGGCGGGGGCGGGGGCATCCACCACCTGGAGGTGAAG
CCG
GCCTACCACTGCAGCGAGCACCGGCACAGCTTTCCCGCCCTGTACTACGAGGAGGGTGCCGACAGCC
TG
AGCCAGCGCGTGTCCTTCCTCAAGCCGCTGACCCGCTCCAAGCGTGACTCCACCTACTCGCAGCTCTC
C
CCCAGACACTACTACTCAGGGTACTCCTCCAGCCCCGAGTACTCATCCGAGAGCACGCACAAGATCTGG
GAG
CGCTTCCGGCCCTACAAGAAGCACCACCGGGAGGAGGTGTACATGGCCGCCGGTCACGCCCTGCGCA
AG
AAGGTCCAGTTCGCCAAGGACGAGGATCTGCATGACATCCTTGATTACTGGAAGGGGGTCTCCGCCCA
G
CAGAAGCTGTGA


Translation (820 aa):
MLRLGLCAAALLCVCRPGAVRADCWLIEGDKGYVWLAICSQNQPPYETIPQHINSTVHDLRLNENKLKAV
L
YSSLNRFGNLTDLNLTKNEISYIEDGAFLGQSSLQVLQLGYNKLSNLTEGMLRGMSRLQFLFVQHNLIE
V
VTPTAFSECPSLISIDLSSNRLSRLDGATFASLASLMVCELAGNPFNCECDLFGFLAWLVVFNNVTKNY
D
RLQCESPREFAGYPLLVPRPYHSLNAITVLQAKCRNGSLPARPVSHPTPYSTDAQREPDENSGFNPDEI
L
SVEPPASSTTDASAGPAIKLHHVTFTSATLVVIIPHPYSKMYILVQYNNSYFSDVMTLKNKKEIVTLDK
L
RAHTEYTFCVTSLRNSRRFNHTCLTFTTRDPVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLR
K
RRMQEEKQKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVSRMASIPSMIGEKLPTAKGLEAG
L
DTPKVATKGNYIEVRTGAGGDGLARPEDDLPDLENGQGSAAEISTIAKEVDKVNQIINNCIDALKLDSA
S
FLGGGSSSGDPELAFECQSLPAAAAASSATGPGALERPSFLSPPYKESSHHPLQRQLSADAAVTRKTCS
V
SSSGSIKSAKVFSLDVPDHPAATGLAKGDSKYIEKGSPLNSPLDRLPLVPAGSGGGSGGGGGIHHLEVK
P
AYHCSEHRHSFPALYYEEGADSLSQRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIW
E
RFRPYKKHHREEVYMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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