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Report for CCDS1914.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1914.1 Public Homo sapiens 2 TEX261 24 110 108 CCDS HistoryNCBI Gene:113419Re-query CCDS DB by CCDS ID:1914.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1914.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272438.9 ENSP00000272438.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272438.9Link to Ensembl Protein Viewer:ENSP00000272438.4Re-query CCDS DB by Nucleotide ID:ENST00000272438Re-query CCDS DB by Protein ID:ENSP00000272438
Original member Current member NCBI NM_144582.3 NP_653183.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144582.3Link to Protein Sequence:NP_653183.2Re-query CCDS DB by Nucleotide ID:NM_144582Re-query CCDS DB by Protein ID:NP_653183Link to BLAST:NP_653183.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653183.2 196 Q6UWH6 196 100% 0 0

Chromosomal Locations for CCDS 1914.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 70988600 70988715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70988915 70989017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70989749 70989816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70991830 70991983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70993696 70993775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70994688 70994757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (591 nt):
ATGTGGTTCATGTACCTGCTGAGCTGGCTGTCGCTCTTCATCCAGGTGGCCTTCATCACGCTGGCTGTCG
CGGCTGGACTCTATTACCTGGCAGAACTGATAGAAGAATACACAGTGGCCACCAGCAGGATCATAAAATA
CATGATCTGGTTCTCCACCGCTGTACTGATTGGCCTCTACGTCTTTGAGCGCTTCCCCACCAGCATGATT
GGAGTGGGCCTATTCACCAACCTCGTCTACTTTGGCCTCCTCCAGACCTTCCCCTTCATCATGCTGACCT
CGCCTAACTTCATCCTGTCGTGTGGACTAGTGGTGGTGAATCATTACCTAGCATTTCAGTTTTTTGCAGA
AGAATATTATCCCTTCTCAGAGGTCCTGGCCTATTTCACTTTCTGCCTGTGGATAATTCCGTTTGCGTTT
TTTGTGTCACTTTCGGCCGGGGAGAACGTCCTGCCCTCTACCATGCAGCCAGGAGATGATGTCGTCTCCA
ATTATTTCACCAAAGGCAAGCGGGGCAAACGCTTAGGGATCCTGGTTGTCTTCTCCTTCATCAAAGAGGC
CATTCTACCCAGTCGTCAGAAGATATACTGA

Translation (196 aa):
MWFMYLLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERFPTSMI
GVGLFTNLVYFGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAEEYYPFSEVLAYFTFCLWIIPFAF
FVSLSAGENVLPSTMQPGDDVVSNYFTKGKRGKRLGILVVFSFIKEAILPSRQKIY


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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