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Report for CCDS57683.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57683.1 Public Mus musculus 9 Oaz2 23 108 98 CCDS HistoryNCBI Gene:18247Re-query CCDS DB by CCDS ID:57683.1Re-query CCDS DB by GeneID:18247See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)


Attributes
Ribosomal slippage (translational frameshift)

Sequence IDs included in CCDS 57683.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000153700.8 ENSMUSP00000136914.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000153700.8Link to Ensembl Protein Viewer:ENSMUSP00000136914.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000153700Re-query CCDS DB by Protein ID:ENSMUSP00000136914
Original member Current member NCBI NM_010952.3 NP_035082.1 Accepted alive Link to Nucleotide Sequence:NM_010952.3Link to Protein Sequence:NP_035082.1Re-query CCDS DB by Nucleotide ID:NM_010952Re-query CCDS DB by Protein ID:NP_035082Link to BLAST:NP_035082.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035082.1 189 O08608-1 189 100% 0 0

Chromosomal Locations for CCDS 57683.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 65676746 65676765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65686196 65686271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65686273 65686353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65687798 65687973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65688821 65688906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65689095 65689225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (570 nt):
ATGATAAACACCCAGGACAGTAGTATTTTGCCGTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAGGCACA
TTGTTCCAGGGCCTCTGTGGTGCTCCGATGCCCCTCACCCACTGTCGAAGATCCCCGGTGGGCGAGGGGG
CGGCAGGGATCCTTCTCTCTCAGCTCTAATATATAAGGACGAGAAGCTCACTGTAACCCAGGACCTCCCT
GTGAACGATGGAAAACCTCACATCGTCCACTTCCAGTATGAGGTCACCGAGGTGAAGGTCTCTTCCTGGG
ATGCAGTCCTGTCCAGCCAGAGCCTGTTTGTAGAAATCCCAGATGGATTATTAGCTGATGGGAGCAAAGA
AGGATTATTAGCACTGCTAGAGTTTGCTGAGGAGAAGATGAAAGTGAACTACGTCTTCATCTGCTTCAGG
AAGGGCCGGGAAGACAGAGCTCCACTCCTGAAGACGTTCAGCTTCTTGGGCTTTGAGATTGTGCGTCCAG
GTCATCCCTGTGTCCCCTCTCGGCCAGATGTGATGTTTATGGTTTACCCCCTGGACCAGAACTTGTCTGA
TGAGGACTAA

Translation (189 aa):
MINTQDSSILPLSKCPQLQCCRHIVPGPLWCSDAPHPLSKIPGGRGGGRDPSLSALIYKDEKLTVTQDLP
VNDGKPHIVHFQYEVTEVKVSSWDAVLSSQSLFVEIPDGLLADGSKEGLLALLEFAEEKMKVNYVFICFR
KGREDRAPLLKTFSFLGFEIVRPGHPCVPSRPDVMFMVYPLDQNLSDED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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