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Report for CCDS92556.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92556.1 Public Homo sapiens 19 CCDC194 24 110 108 CCDS HistoryNCBI Gene:110806280Re-query CCDS DB by CCDS ID:92556.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92556.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000636079.2 ENSP00000490504.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000636079.2Link to Ensembl Protein Viewer:ENSP00000490504.1Re-query CCDS DB by Nucleotide ID:ENST00000636079Re-query CCDS DB by Protein ID:ENSP00000490504
Original member Current member NCBI NM_001395222.1 NP_001382151.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395222.1Link to Protein Sequence:NP_001382151.1Re-query CCDS DB by Nucleotide ID:NM_001395222Re-query CCDS DB by Protein ID:NP_001382151Link to BLAST:NP_001382151.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001382151.1 234 A0A1B0GVG4 234 100% 0 0

Chromosomal Locations for CCDS 92556.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17390509 17390659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17391211 17391343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17391750 17391846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17393835 17394158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (705 nt):
ATGGCCGAGCCGGGGCCGGAGCCCGGGCGTGCCTGGCGGGTGCTCGCCCTGTGCGGGGTGGCCGTGTTCC
TGGCTGCGGCAGCAGCCGGCGGGGCCCTGGTAGCCTGGAATCTGGCCGCCTCGGCTGCTCGGGGACCTCG
CTGCCCGGAGCCAGGGGCCAATGCCACGGCGCCGCCCGGGGACCCGCCGCCTGGGGTCGACGACCTGCGG
CGCCGGCTGGCAGAGGCTGCCGAGCGGGAGGAGGCCCTAGCCAGGCAGCTGGACCAGGCGGAAAGTATCC
GGCACGAGTTGGAGAAGGCATTAAAGGCCTGTGAAGGCCGCCAGAGCCGGCTTCAGACCCAACTAACGAC
ACTGAAGATTGAGATGGACGAAGCCAAGGCACAGGGGACCCAGATGGGGGCCGAGAACGGGGCGCTGACA
GAGGCCCTGGCGCGCTGGGAGGCGGCGGCCACGGAGTCTACGCGGCGGCTGGACGAGGCTCTGCGGCGCG
CAGGCGTGGCGGAGGCCGAGGGCGAAGCCTGTGCGGCCCGGGAGGCGGCGCTGCGCGAACGCCTTAACGT
CCTGGAAGCCGAGATGAGCCCACAGCGCAGAGTGCCCCGGCCGCGTCCCCGCTCGGGGTCCCGACCCCGG
CCCAGCCCTCGCTCGCGCTCTCGCTCCGGACCCTCCGGGGGCTGCCGGCGGCCGGCGCGGCGCGCACGAG
GGTGA

Translation (234 aa):
MAEPGPEPGRAWRVLALCGVAVFLAAAAAGGALVAWNLAASAARGPRCPEPGANATAPPGDPPPGVDDLR
RRLAEAAEREEALARQLDQAESIRHELEKALKACEGRQSRLQTQLTTLKIEMDEAKAQGTQMGAENGALT
EALARWEAAATESTRRLDEALRRAGVAEAEGEACAAREAALRERLNVLEAEMSPQRRVPRPRPRSGSRPR
PSPRSRSRSGPSGGCRRPARRARG


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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