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Report for CCDS43299.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43299.1 Public Homo sapiens 5 ADAMTS16 24 110 108 CCDS HistoryNCBI Gene:170690Re-query CCDS DB by CCDS ID:43299.1Re-query CCDS DB by GeneID:170690See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43299.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000274181.7 ENSP00000274181.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000274181.7Link to Ensembl Protein Viewer:ENSP00000274181.7Re-query CCDS DB by Nucleotide ID:ENST00000274181Re-query CCDS DB by Protein ID:ENSP00000274181
Original member Current member NCBI NM_139056.4 NP_620687.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_139056.4Link to Protein Sequence:NP_620687.2Re-query CCDS DB by Nucleotide ID:NM_139056Re-query CCDS DB by Protein ID:NP_620687Link to BLAST:NP_620687.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_620687.2 1224 Q8TE57-1 1224 100% 0 0

Chromosomal Locations for CCDS 43299.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 5140468 5140539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5140664 5140766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5146130 5146455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5182044 5182305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5186052 5186251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5187725 5187808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5189971 5190130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5191685 5191790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5200132 5200269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5209093 5209246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5222789 5222884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5232368 5232516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5235014 5235186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5236969 5237099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5239151 5239274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5239681 5239925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5242053 5242191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5262657 5262783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5303268 5303469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5303572 5303766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5306504 5306728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5318134 5318281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5319023 5319138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3675 nt):
ATGAAGCCCCGCGCGCGCGGATGGCGGGGCTTGGCGGCGCTGTGGATGCTGTTGGCGCAGGTGGCCGAGC
AGGCACCTGCGTGCGCCATGGGACCCGCAGCGGCAGCGCCTGGGAGCCCGAGCGTCCCGCGTCCTCCTCC
ACCCGCGGAGCGGCCGGGCTGGATGGAAAAGGGCGAATATGACCTGGTCTCTGCCTACGAGGTTGACCAC
AGGGGCGATTACGTGTCCCATGAAATCATGCACCATCAGCGGCGGAGAAGAGCAGTGCCCGTGTCCGAGG
TTGAGTCTCTTCACCTTCGGCTGAAAGGCTCCAGGCACGACTTCCACATGGATCTGAGGACTTCCAGCAG
CCTAGTGGCTCCTGGCTTTATTGTGCAGACGTTGGGAAAGACAGGCACTAAGTCTGTGCAGACTTTACCG
CCAGAGGACTTCTGTTTCTATCAAGGCTCTTTGCGATCACACAGAAACTCCTCAGTGGCCCTTTCAACCT
GCCAAGGCTTGTCAGGCATGATACGAACAGAAGAGGCAGATTACTTCCTAAGGCCACTTCCTTCACACCT
CTCATGGAAACTCGGCAGAGCTGCCCAAGGCAGCTCGCCATCCCACGTACTGTACAAGAGATCCACAGAG
CCCCATGCTCCTGGGGCCAGTGAGGTCCTGGTGACCTCAAGGACATGGGAGCTGGCACATCAACCCCTGC
ACAGCAGCGACCTTCGCCTGGGACTGCCACAAAAGCAGCATTTCTGTGGAAGACGCAAGAAATACATGCC
CCAGCCTCCCAAGGAAGACCTCTTCATCTTGCCAGATGAGTATAAGTCTTGCTTACGGCATAAGCGCTCT
CTTCTGAGGTCCCATAGAAATGAAGAACTGAACGTGGAGACCTTGGTGGTGGTCGACAAAAAGATGATGC
AAAACCATGGCCATGAAAATATCACCACCTACGTGCTCACGATACTCAACATGGTATCTGCTTTATTCAA
AGATGGAACAATAGGAGGAAACATCAACATTGCAATTGTAGGTCTGATTCTTCTAGAAGATGAACAGCCA
GGACTGGTGATAAGTCACCACGCAGACCACACCTTAAGTAGCTTCTGCCAGTGGCAGTCTGGATTGATGG
GGAAAGATGGGACTCGTCATGACCACGCCATCTTACTGACTGGTCTGGATATATGTTCCTGGAAGAATGA
GCCCTGTGACACTTTGGGATTTGCACCCATAAGTGGAATGTGTAGTAAATATCGCAGCTGCACGATTAAT
GAAGATACAGGTCTTGGACTGGCCTTCACCATTGCCCATGAGTCTGGACACAACTTTGGCATGATTCATG
ATGGAGAAGGGAACATGTGCAAAAAGTCCGAGGGCAACATCATGTCCCCTACATTGGCAGGACGCAATGG
AGTCTTCTCCTGGTCACCCTGCAGCCGCCAGTATCTACACAAATTTCTAAGCACCGCTCAAGCTATCTGC
CTTGCTGATCAGCCAAAGCCTGTGAAGGAATACAAGTATCCTGAGAAATTGCCAGGAGAATTATATGATG
CAAACACACAGTGCAAGTGGCAGTTCGGAGAGAAAGCCAAGCTCTGCATGCTGGACTTTAAAAAGGACAT
CTGTAAAGCCCTGTGGTGCCATCGTATTGGAAGGAAATGTGAGACTAAATTTATGCCAGCAGCAGAAGGC
ACAATTTGTGGGCATGACATGTGGTGCCGGGGAGGACAGTGTGTGAAATATGGTGATGAAGGCCCCAAGC
CCACCCATGGCCACTGGTCGGACTGGTCTTCTTGGTCCCCATGCTCCAGGACCTGCGGAGGGGGAGTATC
TCATAGGAGTCGCCTCTGCACCAACCCCAAGCCATCGCATGGAGGGAAGTTCTGTGAGGGCTCCACTCGC
ACTCTGAAGCTCTGCAACAGTCAGAAATGTCCCCGGGACAGTGTTGACTTCCGTGCTGCTCAGTGTGCCG
AGCACAACAGCAGACGATTCAGAGGGCGGCACTACAAGTGGAAGCCTTACACTCAAGTAGAAGATCAGGA
CTTATGCAAACTCTACTGTATCGCAGAAGGATTTGATTTCTTCTTTTCTTTGTCAAATAAAGTCAAAGAT
GGGACTCCATGCTCGGAGGATAGCCGTAATGTTTGTATAGATGGGATATGTGAGAGAGTTGGATGTGACA
ATGTCCTTGGATCTGATGCTGTTGAAGACGTCTGTGGGGTGTGTAACGGGAATAACTCAGCCTGCACGAT
TCACAGGGGTCTCTACACCAAGCACCACCACACCAACCAGTATTATCACATGGTCACCATTCCTTCTGGA
GCCCGGAGTATCCGCATCTATGAAATGAACGTCTCTACCTCCTACATTTCTGTGCGCAATGCCCTCAGAA
GGTACTACCTGAATGGGCACTGGACCGTGGACTGGCCCGGCCGGTACAAATTTTCGGGCACTACTTTCGA
CTACAGACGGTCCTATAATGAGCCCGAGAACTTAATCGCTACTGGACCAACCAACGAGACACTGATTGTG
GAGCTGCTGTTTCAGGGAAGGAACCCGGGTGTTGCCTGGGAATACTCCATGCCTCGCTTGGGGACCGAGA
AGCAGCCCCCTGCCCAGCCCAGCTACACTTGGGCCATCGTGCGCTCTGAGTGCTCCGTGTCCTGCGGAGG
GGGACAGATGACCGTGAGAGAGGGCTGCTACAGAGACCTGAAGTTTCAAGTAAATATGTCCTTCTGCAAT
CCCAAGACACGACCTGTCACGGGGCTGGTGCCTTGCAAAGTATCTGCCTGTCCTCCCAGCTGGTCCGTGG
GGAACTGGAGTGCCTGCAGTCGGACGTGTGGCGGGGGTGCCCAGAGCCGCCCCGTGCAGTGCACACGGCG
GGTGCACTATGACTCGGAGCCAGTCCCGGCCAGCCTGTGCCCTCAGCCTGCTCCCTCCAGCAGGCAGGCC
TGCAACTCTCAGAGCTGCCCACCTGCATGGAGCGCCGGGCCCTGGGCAGAGTGCTCACACACCTGTGGGA
AGGGGTGGAGGAAGCGGGCAGTGGCCTGTAAGAGCACCAACCCCTCGGCCAGAGCGCAGCTGCTGCCCGA
CGCTGTCTGCACCTCCGAGCCCAAGCCCAGGATGCATGAAGCCTGTCTGCTTCAGCGCTGCCACAAGCCC
AAGAAGCTGCAGTGGCTGGTGTCCGCCTGGTCCCAGTGCTCTGTGACATGTGAAAGAGGAACACAGAAAA
GATTCTTAAAATGTGCTGAAAAGTATGTTTCTGGAAAGTATCGAGAGCTGGCCTCAAAGAAGTGCTCACA
TTTGCCGAAGCCCAGCCTGGAGCTGGAACGTGCCTGCGCCCCGCTTCCATGCCCCAGGCACCCCCCATTT
GCTGCTGCGGGACCCTCGAGGGGCAGCTGGTTTGCCTCACCCTGGTCTCAGTGCACGGCCAGCTGTGGGG
GAGGCGTTCAGACGAGGTCCGTGCAGTGCCTGGCTGGGGGCCGGCCGGCCTCAGGCTGCCTCCTGCACCA
GAAGCCTTCGGCCTCCCTGGCCTGCAACACTCACTTCTGCCCCATTGCAGAGAAGAAAGATGCCTTCTGC
AAAGACTACTTCCACTGGTGCTACCTGGTACCCCAGCACGGGATGTGCAGCCACAAGTTCTACGGCAAGC
AGTGCTGCAAGACTTGCTCTAAGTCCAACTTGTGA

Translation (1224 aa):
MKPRARGWRGLAALWMLLAQVAEQAPACAMGPAAAAPGSPSVPRPPPPAERPGWMEKGEYDLVSAYEVDH
RGDYVSHEIMHHQRRRRAVPVSEVESLHLRLKGSRHDFHMDLRTSSSLVAPGFIVQTLGKTGTKSVQTLP
PEDFCFYQGSLRSHRNSSVALSTCQGLSGMIRTEEADYFLRPLPSHLSWKLGRAAQGSSPSHVLYKRSTE
PHAPGASEVLVTSRTWELAHQPLHSSDLRLGLPQKQHFCGRRKKYMPQPPKEDLFILPDEYKSCLRHKRS
LLRSHRNEELNVETLVVVDKKMMQNHGHENITTYVLTILNMVSALFKDGTIGGNINIAIVGLILLEDEQP
GLVISHHADHTLSSFCQWQSGLMGKDGTRHDHAILLTGLDICSWKNEPCDTLGFAPISGMCSKYRSCTIN
EDTGLGLAFTIAHESGHNFGMIHDGEGNMCKKSEGNIMSPTLAGRNGVFSWSPCSRQYLHKFLSTAQAIC
LADQPKPVKEYKYPEKLPGELYDANTQCKWQFGEKAKLCMLDFKKDICKALWCHRIGRKCETKFMPAAEG
TICGHDMWCRGGQCVKYGDEGPKPTHGHWSDWSSWSPCSRTCGGGVSHRSRLCTNPKPSHGGKFCEGSTR
TLKLCNSQKCPRDSVDFRAAQCAEHNSRRFRGRHYKWKPYTQVEDQDLCKLYCIAEGFDFFFSLSNKVKD
GTPCSEDSRNVCIDGICERVGCDNVLGSDAVEDVCGVCNGNNSACTIHRGLYTKHHHTNQYYHMVTIPSG
ARSIRIYEMNVSTSYISVRNALRRYYLNGHWTVDWPGRYKFSGTTFDYRRSYNEPENLIATGPTNETLIV
ELLFQGRNPGVAWEYSMPRLGTEKQPPAQPSYTWAIVRSECSVSCGGGQMTVREGCYRDLKFQVNMSFCN
PKTRPVTGLVPCKVSACPPSWSVGNWSACSRTCGGGAQSRPVQCTRRVHYDSEPVPASLCPQPAPSSRQA
CNSQSCPPAWSAGPWAECSHTCGKGWRKRAVACKSTNPSARAQLLPDAVCTSEPKPRMHEACLLQRCHKP
KKLQWLVSAWSQCSVTCERGTQKRFLKCAEKYVSGKYRELASKKCSHLPKPSLELERACAPLPCPRHPPF
AAAGPSRGSWFASPWSQCTASCGGGVQTRSVQCLAGGRPASGCLLHQKPSASLACNTHFCPIAEKKDAFC
KDYFHWCYLVPQHGMCSHKFYGKQCCKTCSKSNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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