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Report for CCDS12525.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12525.1 Public Homo sapiens 19 MRPS12 24 110 108 CCDS HistoryNCBI Gene:6183Re-query CCDS DB by CCDS ID:12525.1Re-query CCDS DB by GeneID:6183See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12525.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308018.9 ENSP00000308845.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308018.9Link to Ensembl Protein Viewer:ENSP00000308845.3Re-query CCDS DB by Nucleotide ID:ENST00000308018Re-query CCDS DB by Protein ID:ENSP00000308845
Original member Current member EBI ENST00000402029.3 ENSP00000384579.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402029.3Link to Ensembl Protein Viewer:ENSP00000384579.2Re-query CCDS DB by Nucleotide ID:ENST00000402029Re-query CCDS DB by Protein ID:ENSP00000384579
Original member Current member EBI ENST00000407800.2 ENSP00000384952.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407800.2Link to Ensembl Protein Viewer:ENSP00000384952.1Re-query CCDS DB by Nucleotide ID:ENST00000407800Re-query CCDS DB by Protein ID:ENSP00000384952
Original member Current member NCBI NM_021107.1 NP_066930.1 Accepted alive Link to Nucleotide Sequence:NM_021107.1Link to Protein Sequence:NP_066930.1Re-query CCDS DB by Nucleotide ID:NM_021107Re-query CCDS DB by Protein ID:NP_066930Link to BLAST:NP_066930.1
Original member Current member NCBI NM_033362.4 NP_203526.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033362.4Link to Protein Sequence:NP_203526.1Re-query CCDS DB by Nucleotide ID:NM_033362Re-query CCDS DB by Protein ID:NP_203526Link to BLAST:NP_203526.1
Original member Current member NCBI NM_033363.1 NP_203527.1 Accepted alive Link to Nucleotide Sequence:NM_033363.1Link to Protein Sequence:NP_203527.1Re-query CCDS DB by Nucleotide ID:NM_033363Re-query CCDS DB by Protein ID:NP_203527Link to BLAST:NP_203527.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066930.1 138 O15235 138 100% 0 0
NP_203526.1 138 O15235 138 100% 0 0
NP_203527.1 138 O15235 138 100% 0 0

Chromosomal Locations for CCDS 12525.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 38931295 38931343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38932333 38932700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (417 nt):
ATGTCCTGGTCTGGCCTTCTCCATGGCCTCAACACGTCCCTAACTTGTGGCCCAGCTCTGGTTCCCCGGC
TCTGGGCTACCTGCTCCATGGCTACCCTGAACCAGATGCACCGCCTGGGGCCCCCCAAGCGGCCGCCTCG
GAAGCTGGGCCCCACGGAAGGCCGGCCGCAGCTGAAGGGTGTGGTCCTGTGCACGTTTACCCGCAAGCCG
AAGAAGCCCAACTCAGCCAATCGCAAGTGCTGTCGAGTGCGGCTCAGCACTGGCCGCGAGGCCGTCTGCT
TCATCCCTGGGGAGGGCCACACCCTGCAGGAGCACCAGATTGTCCTTGTGGAGGGCGGCCGCACCCAGGA
CCTGCCAGGCGTCAAGCTCACCGTTGTGCGTGGCAAGTACGACTGTGGCCACGTGCAGAAGAAGTGA

Translation (138 aa):
MSWSGLLHGLNTSLTCGPALVPRLWATCSMATLNQMHRLGPPKRPPRKLGPTEGRPQLKGVVLCTFTRKP
KKPNSANRKCCRVRLSTGREAVCFIPGEGHTLQEHQIVLVEGGRTQDLPGVKLTVVRGKYDCGHVQKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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